Yokoyama S - Search Results

1

High-pressure NMR spectroscopy for characterizing folding intermediates and denatured states of proteins.

Kamatari YO, Kitahara R, Yamada H, Yokoyama S, Akasaka K. Kamatari YO, et al. Among authors: yokoyama s. Methods. 2004 Sep;34(1):133-43. doi: 10.1016/j.ymeth.2004.03.010. Methods. 2004. PMID: 15283922 Review.

2

NMR snapshots of a fluctuating protein structure: ubiquitin at 30 bar-3 kbar.

Kitahara R, Yokoyama S, Akasaka K. Kitahara R, et al. Among authors: yokoyama s. J Mol Biol. 2005 Mar 25;347(2):277-85. doi: 10.1016/j.jmb.2005.01.052. J Mol Biol. 2005. PMID: 15740740

3

Evolutionally conserved intermediates between ubiquitin and NEDD8.

Kitahara R, Yamaguchi Y, Sakata E, Kasuya T, Tanaka K, Kato K, Yokoyama S, Akasaka K. Kitahara R, et al. Among authors: yokoyama s. J Mol Biol. 2006 Oct 20;363(2):395-404. doi: 10.1016/j.jmb.2006.07.074. Epub 2006 Aug 2. J Mol Biol. 2006. PMID: 16979187

4

Basic folded and low-populated locally disordered conformers of SUMO-2 characterized by NMR spectroscopy at varying pressures.

Kitahara R, Zhao C, Saito K, Koshiba S, Ioune M, Kigawa T, Yokoyama S, Akasaka K. Kitahara R, et al. Among authors: yokoyama s. Biochemistry. 2008 Jan 8;47(1):30-9. doi: 10.1021/bi7014458. Epub 2007 Dec 15. Biochemistry. 2008. PMID: 18081309

5

Pressure-jump NMR study of dissociation and association of amyloid protofibrils.

Kamatari YO, Yokoyama S, Tachibana H, Akasaka K. Kamatari YO, et al. Among authors: yokoyama s. J Mol Biol. 2005 Jun 24;349(5):916-21. doi: 10.1016/j.jmb.2005.04.010. J Mol Biol. 2005. PMID: 15907935

6

Cold denaturation of ubiquitin at high pressure.

Kitahara R, Okuno A, Kato M, Taniguchi Y, Yokoyama S, Akasaka K. Kitahara R, et al. Among authors: yokoyama s. Magn Reson Chem. 2006 Jul;44 Spec No:S108-13. doi: 10.1002/mrc.1820. Magn Reson Chem. 2006. PMID: 16826551

7

A delicate interplay of structure, dynamics, and thermodynamics for function: a high pressure NMR study of outer surface protein A.

Kitahara R, Simorellis AK, Hata K, Maeno A, Yokoyama S, Koide S, Akasaka K. Kitahara R, et al. Among authors: yokoyama s. Biophys J. 2012 Feb 22;102(4):916-26. doi: 10.1016/j.bpj.2011.12.010. Epub 2012 Feb 21. Biophys J. 2012. PMID: 22385863 Free PMC article.

8

Cavity as a source of conformational fluctuation and high-energy state: high-pressure NMR study of a cavity-enlarged mutant of T4 lysozyme.

Maeno A, Sindhikara D, Hirata F, Otten R, Dahlquist FW, Yokoyama S, Akasaka K, Mulder FA, Kitahara R. Maeno A, et al. Among authors: yokoyama s. Biophys J. 2015 Jan 6;108(1):133-45. doi: 10.1016/j.bpj.2014.11.012. Biophys J. 2015. PMID: 25564860 Free PMC article.

9

Local conformational transition of Hydrogenobacter thermophilus cytochrome c552 relevant to its redox potential.

Takayama SJ, Takahashi YT, Mikami S, Irie K, Kawano S, Yamamoto Y, Hemmi H, Kitahara R, Yokoyama S, Akasaka K. Takayama SJ, et al. Among authors: yokoyama s. Biochemistry. 2007 Aug 14;46(32):9215-24. doi: 10.1021/bi7000714. Epub 2007 Jul 21. Biochemistry. 2007. PMID: 17658890

10

Aberrant assembly of RNA recognition motif 1 links to pathogenic conversion of TAR DNA-binding protein of 43 kDa (TDP-43).

Shodai A, Morimura T, Ido A, Uchida T, Ayaki T, Takahashi R, Kitazawa S, Suzuki S, Shirouzu M, Kigawa T, Muto Y, Yokoyama S, Takahashi R, Kitahara R, Ito H, Fujiwara N, Urushitani M. Shodai A, et al. Among authors: yokoyama s. J Biol Chem. 2013 May 24;288(21):14886-905. doi: 10.1074/jbc.M113.451849. Epub 2013 Apr 4. J Biol Chem. 2013. PMID: 23558684 Free PMC article. Clinical Trial.

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