Yildirim AD - Search Results

1

PACT establishes a posttranscriptional brake on mitochondrial biogenesis by promoting the maturation of miR-181c.

Dogan AE, Hamid SM, Yildirim AD, Yildirim Z, Sen G, Riera CE, Gottlieb RA, Erbay E. Dogan AE, et al. Among authors: yildirim ad. J Biol Chem. 2022 Jul;298(7):102050. doi: 10.1016/j.jbc.2022.102050. Epub 2022 May 19. J Biol Chem. 2022. PMID: 35598827 Free PMC article.

2

Prevention of atherosclerosis by bioactive palmitoleate through suppression of organelle stress and inflammasome activation.

Çimen I, Kocatürk B, Koyuncu S, Tufanlı Ö, Onat UI, Yıldırım AD, Apaydın O, Demirsoy Ş, Aykut ZG, Nguyen UT, Watkins SM, Hotamışlıgil GS, Erbay E. Çimen I, et al. Among authors: yildirim ad. Sci Transl Med. 2016 Sep 28;8(358):358ra126. doi: 10.1126/scitranslmed.aaf9087. Sci Transl Med. 2016. PMID: 27683551

3

Intercepting the Lipid-Induced Integrated Stress Response Reduces Atherosclerosis.

Onat UI, Yildirim AD, Tufanli Ö, Çimen I, Kocatürk B, Veli Z, Hamid SM, Shimada K, Chen S, Sin J, Shah PK, Gottlieb RA, Arditi M, Erbay E. Onat UI, et al. Among authors: yildirim ad. J Am Coll Cardiol. 2019 Mar 19;73(10):1149-1169. doi: 10.1016/j.jacc.2018.12.055. J Am Coll Cardiol. 2019. PMID: 30871699 Free PMC article.

4

Double bond configuration of palmitoleate is critical for atheroprotection.

Cimen I, Yildirim Z, Dogan AE, Yildirim AD, Tufanli O, Onat UI, Nguyen U, Watkins SM, Weber C, Erbay E. Cimen I, et al. Among authors: yildirim ad. Mol Metab. 2019 Oct;28:58-72. doi: 10.1016/j.molmet.2019.08.004. Epub 2019 Aug 7. Mol Metab. 2019. PMID: 31422082 Free PMC article.

5

Targeting IRE1 endoribonuclease activity alleviates cardiovascular lesions in a murine model of Kawasaki disease vasculitis.

Marek-Iannucci S, Yildirim AD, Hamid SM, Ozdemir AB, Gomez AC, Kocatürk B, Porritt RA, Fishbein MC, Iwawaki T, Noval Rivas M, Erbay E, Arditi M. Marek-Iannucci S, et al. Among authors: yildirim ad. JCI Insight. 2022 Mar 22;7(6):e157203. doi: 10.1172/jci.insight.157203. JCI Insight. 2022. PMID: 35167493 Free PMC article.

6

ER Stress-Induced Sphingosine-1-Phosphate Lyase Phosphorylation Potentiates the Mitochondrial Unfolded Protein Response.

Yildirim AD, Citir M, Dogan AE, Veli Z, Yildirim Z, Tufanli O, Traynor-Kaplan A, Schultz C, Erbay E. Yildirim AD, et al. J Lipid Res. 2022 Oct;63(10):100279. doi: 10.1016/j.jlr.2022.100279. Epub 2022 Sep 12. J Lipid Res. 2022. PMID: 36100091 Free PMC article.

7

Evaluating the role of the nuclear microenvironment in gene function by population-based modeling.

Yildirim A, Hua N, Boninsegna L, Zhan Y, Polles G, Gong K, Hao S, Li W, Zhou XJ, Alber F. Yildirim A, et al. Nat Struct Mol Biol. 2023 Aug;30(8):1193-1206. doi: 10.1038/s41594-023-01036-1. Epub 2023 Aug 14. Nat Struct Mol Biol. 2023. PMID: 37580627 Free PMC article.

8

Integrative approaches in genome structure analysis.

Boninsegna L, Yildirim A, Zhan Y, Alber F. Boninsegna L, et al. Structure. 2022 Jan 6;30(1):24-36. doi: 10.1016/j.str.2021.12.003. Epub 2021 Dec 27. Structure. 2022. PMID: 34963059 Free PMC article. Review.

9

Integrative genome modeling platform reveals essentiality of rare contact events in 3D genome organizations.

Boninsegna L, Yildirim A, Polles G, Zhan Y, Quinodoz SA, Finn EH, Guttman M, Zhou XJ, Alber F. Boninsegna L, et al. Nat Methods. 2022 Aug;19(8):938-949. doi: 10.1038/s41592-022-01527-x. Epub 2022 Jul 11. Nat Methods. 2022. PMID: 35817938 Free PMC article.

10

Uncovering the Principles of Genome Folding by 3D Chromatin Modeling.

Yildirim A, Boninsegna L, Zhan Y, Alber F. Yildirim A, et al. Cold Spring Harb Perspect Biol. 2022 Jun 14;14(6):a039693. doi: 10.1101/cshperspect.a039693. Cold Spring Harb Perspect Biol. 2022. PMID: 34400556 Review.

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