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Understanding metric-related pitfalls in image analysis validation.
Nat Methods. 2024 Feb;21(2):182-194. doi: 10.1038/s41592-023-02150-0. Epub 2024 Feb 12.
Nat Methods. 2024.
PMID: 38347140
Review.
Understanding metric-related pitfalls in image analysis validation.
Reinke A, Tizabi MD, Baumgartner M, Eisenmann M, Heckmann-Nötzel D, Kavur AE, Rädsch T, Sudre CH, Acion L, Antonelli M, Arbel T, Bakas S, Benis A, Blaschko M, Buettner F, Cardoso MJ, Cheplygina V, Chen J, Christodoulou E, Cimini BA, Collins GS, Farahani K, Ferrer L, Galdran A, van Ginneken B, Glocker B, Godau P, Haase R, Hashimoto DA, Hoffman MM, Huisman M, Isensee F, Jannin P, Kahn CE, Kainmueller D, Kainz B, Karargyris A, Karthikesalingam A, Kenngott H, Kleesiek J, Kofler F, Kooi T, Kopp-Schneider A, Kozubek M, Kreshuk A, Kurc T, Landman BA, Litjens G, Madani A, Maier-Hein K, Martel AL, Mattson P, Meijering E, Menze B, Moons KGM, Müller H, Nichyporuk B, Nickel F, Petersen J, Rafelski SM, Rajpoot N, Reyes M, Riegler MA, Rieke N, Saez-Rodriguez J, Sánchez CI, Shetty S, van Smeden M, Summers RM, Taha AA, Tiulpin A, Tsaftaris SA, Calster BV, Varoquaux G, Wiesenfarth M, Yaniv ZR, Jäger PF, Maier-Hein L.
Reinke A, et al. Among authors: yaniv zr.
ArXiv [Preprint]. 2024 Feb 23:arXiv:2302.01790v4.
ArXiv. 2024.
PMID: 36945687
Free PMC article.
Updated.
Preprint.
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IBEX: A versatile multiplex optical imaging approach for deep phenotyping and spatial analysis of cells in complex tissues.
Radtke AJ, Kandov E, Lowekamp B, Speranza E, Chu CJ, Gola A, Thakur N, Shih R, Yao L, Yaniv ZR, Beuschel RT, Kabat J, Croteau J, Davis J, Hernandez JM, Germain RN.
Radtke AJ, et al. Among authors: yaniv zr.
Proc Natl Acad Sci U S A. 2020 Dec 29;117(52):33455-33465. doi: 10.1073/pnas.2018488117. Epub 2020 Dec 21.
Proc Natl Acad Sci U S A. 2020.
PMID: 33376221
Free PMC article.
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A marker-free registration method for standing X-ray panorama reconstruction for hip-knee-ankle axis deformity assessment.
Ben-Zikri YK, Yaniv ZR, Baum K, Linte CA.
Ben-Zikri YK, et al. Among authors: yaniv zr.
Comput Methods Biomech Biomed Eng Imaging Vis. 2019;7(4):464-478. doi: 10.1080/21681163.2018.1537859. Epub 2018 Dec 19.
Comput Methods Biomech Biomed Eng Imaging Vis. 2019.
PMID: 31186995
Free PMC article.
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Image-Guided Interventions: We've come a long way, but are we there?
Linte CA, Yaniv ZR.
Linte CA, et al. Among authors: yaniv zr.
IEEE Pulse. 2016 Nov-Dec;7(6):46-50. doi: 10.1109/MPUL.2016.2606466.
IEEE Pulse. 2016.
PMID: 27875119
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