Yang P - Search Results

1

Single-Cell Transcriptome Profiling Reveals Multicellular Ecosystem of Nucleus Pulposus during Degeneration Progression.

Tu J, Li W, Yang S, Yang P, Yan Q, Wang S, Lai K, Bai X, Wu C, Ding W, Cooper-White J, Diwan A, Yang C, Yang H, Zou J. Tu J, et al. Among authors: yang s, yang c, yang p, yang h. Adv Sci (Weinh). 2022 Jan;9(3):e2103631. doi: 10.1002/advs.202103631. Epub 2021 Nov 26. Adv Sci (Weinh). 2022. PMID: 34825784 Free PMC article.

2

Multi-omic Profiling Reveals Dynamics of the Phased Progression of Pluripotency.

Yang P, Humphrey SJ, Cinghu S, Pathania R, Oldfield AJ, Kumar D, Perera D, Yang JYH, James DE, Mann M, Jothi R. Yang P, et al. Among authors: yang jyh. Cell Syst. 2019 May 22;8(5):427-445.e10. doi: 10.1016/j.cels.2019.03.012. Epub 2019 May 8. Cell Syst. 2019. PMID: 31078527 Free PMC article.

3

Feature selection revisited in the single-cell era.

Yang P, Huang H, Liu C. Yang P, et al. Genome Biol. 2021 Dec 1;22(1):321. doi: 10.1186/s13059-021-02544-3. Genome Biol. 2021. PMID: 34847932 Free PMC article. Review.

4

Benchmarking clustering algorithms on estimating the number of cell types from single-cell RNA-sequencing data.

Yu L, Cao Y, Yang JYH, Yang P. Yu L, et al. Among authors: yang jyh, yang p. Genome Biol. 2022 Feb 8;23(1):49. doi: 10.1186/s13059-022-02622-0. Genome Biol. 2022. PMID: 35135612 Free PMC article.

5

Mouse organogenesis atlas at single-cell resolution.

Yang P, Tam PPL. Yang P, et al. Cell. 2022 May 12;185(10):1625-1627. doi: 10.1016/j.cell.2022.04.026. Cell. 2022. PMID: 35561663 Free article.

6

Transcriptional network dynamics during the progression of pluripotency revealed by integrative statistical learning.

Kim HJ, Osteil P, Humphrey SJ, Cinghu S, Oldfield AJ, Patrick E, Wilkie EE, Peng G, Suo S, Jothi R, Tam PPL, Yang P. Kim HJ, et al. Among authors: yang p. Nucleic Acids Res. 2020 Feb 28;48(4):1828-1842. doi: 10.1093/nar/gkz1179. Nucleic Acids Res. 2020. PMID: 31853542 Free PMC article.

7

scDC: single cell differential composition analysis.

Cao Y, Lin Y, Ormerod JT, Yang P, Yang JYH, Lo KK. Cao Y, et al. Among authors: yang jyh, yang p. BMC Bioinformatics. 2019 Dec 24;20(Suppl 19):721. doi: 10.1186/s12859-019-3211-9. BMC Bioinformatics. 2019. PMID: 31870280 Free PMC article.

8

CiteFuse enables multi-modal analysis of CITE-seq data.

Kim HJ, Lin Y, Geddes TA, Yang JYH, Yang P. Kim HJ, et al. Among authors: yang jyh, yang p. Bioinformatics. 2020 Aug 15;36(14):4137-4143. doi: 10.1093/bioinformatics/btaa282. Bioinformatics. 2020. PMID: 32353146

9

Clonal evolution in liver cancer at single-cell and single-variant resolution.

Su X, Zhao L, Shi Y, Zhang R, Long Q, Bai S, Luo Q, Lin Y, Zou X, Ghazanfar S, Tao K, Yang G, Wang L, He KY, Cui X, He J, Wu JX, Han B, Yan B, Deng B, Wang N, Li X, Yang P, Hou S, Sun J, Yang JYH, Chen J, Han ZG. Su X, et al. Among authors: yang jyh, yang p, yang g. J Hematol Oncol. 2021 Feb 2;14(1):22. doi: 10.1186/s13045-021-01036-y. J Hematol Oncol. 2021. PMID: 33531041 Free PMC article.

10

Protocol for the processing and downstream analysis of phosphoproteomic data with PhosR.

Kim HJ, Kim T, Xiao D, Yang P. Kim HJ, et al. Among authors: yang p. STAR Protoc. 2021 Jun 5;2(2):100585. doi: 10.1016/j.xpro.2021.100585. eCollection 2021 Jun 18. STAR Protoc. 2021. PMID: 34151303 Free PMC article.

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