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Genomic Analysis Enlightens Agaricales Lifestyle Evolution and Increasing Peroxidase Diversity.
Ruiz-Dueñas FJ, Barrasa JM, Sánchez-García M, Camarero S, Miyauchi S, Serrano A, Linde D, Babiker R, Drula E, Ayuso-Fernández I, Pacheco R, Padilla G, Ferreira P, Barriuso J, Kellner H, Castanera R, Alfaro M, Ramírez L, Pisabarro AG, Riley R, Kuo A, Andreopoulos W, LaButti K, Pangilinan J, Tritt A, Lipzen A, He G, Yan M, Ng V, Grigoriev IV, Cullen D, Martin F, Rosso MN, Henrissat B, Hibbett D, Martínez AT. Ruiz-Dueñas FJ, et al. Among authors: yan m. Mol Biol Evol. 2021 Apr 13;38(4):1428-1446. doi: 10.1093/molbev/msaa301. Mol Biol Evol. 2021. PMID: 33211093 Free PMC article.
Regulation of Yeast-to-Hyphae Transition in Yarrowia lipolytica.
Pomraning KR, Bredeweg EL, Kerkhoven EJ, Barry K, Haridas S, Hundley H, LaButti K, Lipzen A, Yan M, Magnuson JK, Simmons BA, Grigoriev IV, Nielsen J, Baker SE. Pomraning KR, et al. Among authors: yan m. mSphere. 2018 Dec 5;3(6):e00541-18. doi: 10.1128/mSphere.00541-18. mSphere. 2018. PMID: 30518677 Free PMC article.
Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits.
Miyauchi S, Kiss E, Kuo A, Drula E, Kohler A, Sánchez-García M, Morin E, Andreopoulos B, Barry KW, Bonito G, Buée M, Carver A, Chen C, Cichocki N, Clum A, Culley D, Crous PW, Fauchery L, Girlanda M, Hayes RD, Kéri Z, LaButti K, Lipzen A, Lombard V, Magnuson J, Maillard F, Murat C, Nolan M, Ohm RA, Pangilinan J, Pereira MF, Perotto S, Peter M, Pfister S, Riley R, Sitrit Y, Stielow JB, Szöllősi G, Žifčáková L, Štursová M, Spatafora JW, Tedersoo L, Vaario LM, Yamada A, Yan M, Wang P, Xu J, Bruns T, Baldrian P, Vilgalys R, Dunand C, Henrissat B, Grigoriev IV, Hibbett D, Nagy LG, Martin FM. Miyauchi S, et al. Among authors: yan m. Nat Commun. 2020 Oct 12;11(1):5125. doi: 10.1038/s41467-020-18795-w. Nat Commun. 2020. PMID: 33046698 Free PMC article.
The Melampsora americana Population on Salix purpurea in the Great Lakes Region Is Highly Diverse with a Contributory Influence of Clonality.
Crowell CR, Wilkerson DG, Beckauri M, Cala AR, McMullen PW, Mondo S, Andreopoulos W, Lipzen A, Lail K, Yan M, Ng V, Grigoriev IV, Smart LB, Smart CD. Crowell CR, et al. Among authors: yan m. Phytopathology. 2022 Apr;112(4):907-916. doi: 10.1094/PHYTO-05-21-0201-R. Epub 2022 Mar 18. Phytopathology. 2022. PMID: 34579556
Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics.
Van Goethem MW, Osborn AR, Bowen BP, Andeer PF, Swenson TL, Clum A, Riley R, He G, Koriabine M, Sandor L, Yan M, Daum CG, Yoshinaga Y, Makhalanyane TP, Garcia-Pichel F, Visel A, Pennacchio LA, O'Malley RC, Northen TR. Van Goethem MW, et al. Among authors: yan m. Commun Biol. 2021 Nov 18;4(1):1302. doi: 10.1038/s42003-021-02809-4. Commun Biol. 2021. PMID: 34795375 Free PMC article.
Co‑cultivation of the anaerobic fungus Caecomyces churrovis with Methanobacterium bryantii enhances transcription of carbohydrate binding modules, dockerins, and pyruvate formate lyases on specific substrates.
Brown JL, Swift CL, Mondo SJ, Seppala S, Salamov A, Singan V, Henrissat B, Drula E, Henske JK, Lee S, LaButti K, He G, Yan M, Barry K, Grigoriev IV, O'Malley MA. Brown JL, et al. Among authors: yan m. Biotechnol Biofuels. 2021 Dec 10;14(1):234. doi: 10.1186/s13068-021-02083-w. Biotechnol Biofuels. 2021. PMID: 34893091 Free PMC article.
Population genomics provides insights into the genetic basis of adaptive evolution in the mushroom-forming fungus Lentinula edodes.
Zhang J, Shen N, Li C, Xiang X, Liu G, Gui Y, Patev S, Hibbett DS, Barry K, Andreopoulos W, Lipzen A, Riley R, He G, Yan M, Grigoriev IV, Shan Kwan H, Kit Cheung M, Bian Y, Xiao Y. Zhang J, et al. Among authors: yan m. J Adv Res. 2021 Sep 28;38:91-106. doi: 10.1016/j.jare.2021.09.008. eCollection 2022 May. J Adv Res. 2021. PMID: 35572413 Free PMC article.
6,631 results