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Routine Metagenomics Service for ICU Patients with Respiratory Infection.
Charalampous T, Alcolea-Medina A, Snell LB, Alder C, Tan M, Williams TGS, Al-Yaakoubi N, Humayun G, Meadows CIS, Wyncoll DLA, Paul R, Hemsley CJ, Jeyaratnam D, Newsholme W, Goldenberg S, Patel A, Tucker F, Nebbia G, Wilks M, Chand M, Cliff PR, Batra R, O'Grady J, Barrett NA, Edgeworth JD. Charalampous T, et al. Among authors: al yaakoubi n. Am J Respir Crit Care Med. 2024 Jan 15;209(2):164-174. doi: 10.1164/rccm.202305-0901OC. Am J Respir Crit Care Med. 2024. PMID: 37938162 Free PMC article.
Feasibility and clinical utility of local rapid Nanopore influenza A virus whole genome sequencing for integrated outbreak management, genotypic resistance detection and timely surveillance.
Williams TGS, Snell LB, Alder C, Charalampous T, Alcolea-Medina A, Sehmi JK, Al-Yaakoubi N, Humayun G, Miah S, Lackenby A, Zambon M, Batra R, Douthwaite S, Edgeworth JD, Nebbia G. Williams TGS, et al. Among authors: al yaakoubi n. Microb Genom. 2023 Aug;9(8):mgen001083. doi: 10.1099/mgen.0.001083. Microb Genom. 2023. PMID: 37590039 Free PMC article.
The ongoing Streptococcus pyogenes (Group A Streptococcus) outbreak in London, United Kingdom, in December 2022: a molecular epidemiology study.
Alcolea-Medina A, Snell LB, Alder C, Charalampous T, Williams TGS; Synnovis Microbiology Laboratory Group; Tan MKI, Al-Yaakoubi N, Humayun G, Newsholme W, Goldenberg S, Nebbia G, Neil SJD, Batra R, Edgeworth JD. Alcolea-Medina A, et al. Among authors: al yaakoubi n. Clin Microbiol Infect. 2023 Jul;29(7):887-890. doi: 10.1016/j.cmi.2023.03.001. Epub 2023 Mar 15. Clin Microbiol Infect. 2023. PMID: 36925107 Free PMC article.