Xu Y - Search Results

1

Single-cell RNA sequencing identifies diverse roles of epithelial cells in idiopathic pulmonary fibrosis.

Xu Y, Mizuno T, Sridharan A, Du Y, Guo M, Tang J, Wikenheiser-Brokamp KA, Perl AT, Funari VA, Gokey JJ, Stripp BR, Whitsett JA. Xu Y, et al. JCI Insight. 2016 Dec 8;1(20):e90558. doi: 10.1172/jci.insight.90558. JCI Insight. 2016. PMID: 27942595 Free PMC article.

2

Hippo/Yap signaling controls epithelial progenitor cell proliferation and differentiation in the embryonic and adult lung.

Lange AW, Sridharan A, Xu Y, Stripp BR, Perl AK, Whitsett JA. Lange AW, et al. Among authors: xu y. J Mol Cell Biol. 2015 Feb;7(1):35-47. doi: 10.1093/jmcb/mju046. Epub 2014 Dec 5. J Mol Cell Biol. 2015. PMID: 25480985 Free PMC article.

3

SINCERA: A Pipeline for Single-Cell RNA-Seq Profiling Analysis.

Guo M, Wang H, Potter SS, Whitsett JA, Xu Y. Guo M, et al. Among authors: xu y. PLoS Comput Biol. 2015 Nov 24;11(11):e1004575. doi: 10.1371/journal.pcbi.1004575. eCollection 2015 Nov. PLoS Comput Biol. 2015. PMID: 26600239 Free PMC article.

4

SLICE: determining cell differentiation and lineage based on single cell entropy.

Guo M, Bao EL, Wagner M, Whitsett JA, Xu Y. Guo M, et al. Among authors: xu y. Nucleic Acids Res. 2017 Apr 20;45(7):e54. doi: 10.1093/nar/gkw1278. Nucleic Acids Res. 2017. PMID: 27998929 Free PMC article.

5

Single-Cell Transcriptome Analysis Using SINCERA Pipeline.

Guo M, Xu Y. Guo M, et al. Among authors: xu y. Methods Mol Biol. 2018;1751:209-222. doi: 10.1007/978-1-4939-7710-9_15. Methods Mol Biol. 2018. PMID: 29508300 Free PMC article.

6

Active epithelial Hippo signaling in idiopathic pulmonary fibrosis.

Gokey JJ, Sridharan A, Xu Y, Green J, Carraro G, Stripp BR, Perl AT, Whitsett JA. Gokey JJ, et al. Among authors: xu y. JCI Insight. 2018 Mar 22;3(6):e98738. doi: 10.1172/jci.insight.98738. JCI Insight. 2018. PMID: 29563341 Free PMC article.

7

MEG3 is increased in idiopathic pulmonary fibrosis and regulates epithelial cell differentiation.

Gokey JJ, Snowball J, Sridharan A, Speth JP, Black KE, Hariri LP, Perl AT, Xu Y, Whitsett JA. Gokey JJ, et al. Among authors: xu y. JCI Insight. 2018 Sep 6;3(17):e122490. doi: 10.1172/jci.insight.122490. eCollection 2018 Sep 6. JCI Insight. 2018. PMID: 30185671 Free PMC article.

8

Single-Cell Transcriptomic Analysis Identifies a Unique Pulmonary Lymphangioleiomyomatosis Cell.

Guo M, Yu JJ, Perl AK, Wikenheiser-Brokamp KA, Riccetti M, Zhang EY, Sudha P, Adam M, Potter A, Kopras EJ, Giannikou K, Potter SS, Sherman S, Hammes SR, Kwiatkowski DJ, Whitsett JA, McCormack FX, Xu Y. Guo M, et al. Among authors: xu y. Am J Respir Crit Care Med. 2020 Nov 15;202(10):1373-1387. doi: 10.1164/rccm.201912-2445OC. Am J Respir Crit Care Med. 2020. PMID: 32603599 Free PMC article.

9

Surfactant protein C mutation links postnatal type 2 cell dysfunction to adult disease.

Sitaraman S, Martin EP, Na CL, Zhao S, Green J, Deshmukh H, Perl AT, Bridges JP, Xu Y, Weaver TE. Sitaraman S, et al. Among authors: xu y. JCI Insight. 2021 Jul 22;6(14):e142501. doi: 10.1172/jci.insight.142501. JCI Insight. 2021. PMID: 34138759 Free PMC article.

10

Foxa3 induces goblet cell metaplasia and inhibits innate antiviral immunity.

Chen G, Korfhagen TR, Karp CL, Impey S, Xu Y, Randell SH, Kitzmiller J, Maeda Y, Haitchi HM, Sridharan A, Senft AP, Whitsett JA. Chen G, et al. Among authors: xu y. Am J Respir Crit Care Med. 2014 Feb 1;189(3):301-13. doi: 10.1164/rccm.201306-1181OC. Am J Respir Crit Care Med. 2014. PMID: 24392884 Free PMC article.

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