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Plasma cell-free RNA characteristics in COVID-19 patients.
Wang Y, Li J, Zhang L, Sun HX, Zhang Z, Xu J, Xu Y, Lin Y, Zhu A, Luo Y, Zhou H, Wu Y, Lin S, Sun Y, Xiao F, Chen R, Wen L, Chen W, Li F, Ou R, Zhang Y, Kuo T, Li Y, Li L, Sun J, Sun K, Zhuang Z, Lu H, Chen Z, Mai G, Zhuo J, Qian P, Chen J, Yang H, Wang J, Xu X, Zhong N, Zhao J, Li J, Zhao J, Jin X. Wang Y, et al. Among authors: xu x, xu y, xu j. Genome Res. 2022 Feb;32(2):228-241. doi: 10.1101/gr.276175.121. Epub 2022 Jan 21. Genome Res. 2022. PMID: 35064006 Free PMC article.
Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor.
Xu X, Hou Y, Yin X, Bao L, Tang A, Song L, Li F, Tsang S, Wu K, Wu H, He W, Zeng L, Xing M, Wu R, Jiang H, Liu X, Cao D, Guo G, Hu X, Gui Y, Li Z, Xie W, Sun X, Shi M, Cai Z, Wang B, Zhong M, Li J, Lu Z, Gu N, Zhang X, Goodman L, Bolund L, Wang J, Yang H, Kristiansen K, Dean M, Li Y, Wang J. Xu X, et al. Cell. 2012 Mar 2;148(5):886-95. doi: 10.1016/j.cell.2012.02.025. Cell. 2012. PMID: 22385958 Free PMC article.
Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells.
Wu L, Zhang X, Zhao Z, Wang L, Li B, Li G, Dean M, Yu Q, Wang Y, Lin X, Rao W, Mei Z, Li Y, Jiang R, Yang H, Li F, Xie G, Xu L, Wu K, Zhang J, Chen J, Wang T, Kristiansen K, Zhang X, Li Y, Yang H, Wang J, Hou Y, Xu X. Wu L, et al. Among authors: xu l, xu x. Gigascience. 2015 Nov 5;4:51. doi: 10.1186/s13742-015-0091-4. eCollection 2015. Gigascience. 2015. PMID: 26550473 Free PMC article.
SCRaMbLE generates designed combinatorial stochastic diversity in synthetic chromosomes.
Shen Y, Stracquadanio G, Wang Y, Yang K, Mitchell LA, Xue Y, Cai Y, Chen T, Dymond JS, Kang K, Gong J, Zeng X, Zhang Y, Li Y, Feng Q, Xu X, Wang J, Wang J, Yang H, Boeke JD, Bader JS. Shen Y, et al. Among authors: xu x. Genome Res. 2016 Jan;26(1):36-49. doi: 10.1101/gr.193433.115. Epub 2015 Nov 13. Genome Res. 2016. PMID: 26566658 Free PMC article.
Frequent alterations in cytoskeleton remodelling genes in primary and metastatic lung adenocarcinomas.
Wu K, Zhang X, Li F, Xiao D, Hou Y, Zhu S, Liu D, Ye X, Ye M, Yang J, Shao L, Pan H, Lu N, Yu Y, Liu L, Li J, Huang L, Tang H, Deng Q, Zheng Y, Peng L, Liu G, Gu X, He P, Gu Y, Lin W, He H, Xie G, Liang H, An N, Wang H, Teixeira M, Vieira J, Liang W, Zhao X, Peng Z, Mu F, Zhang X, Xu X, Yang H, Kristiansen K, Wang J, Zhong N, Wang J, Pan-Hammarström Q, He J. Wu K, et al. Among authors: xu x. Nat Commun. 2015 Dec 9;6:10131. doi: 10.1038/ncomms10131. Nat Commun. 2015. PMID: 26647728 Free PMC article.
RED-ML: a novel, effective RNA editing detection method based on machine learning.
Xiong H, Liu D, Li Q, Lei M, Xu L, Wu L, Wang Z, Ren S, Li W, Xia M, Lu L, Lu H, Hou Y, Zhu S, Liu X, Sun Y, Wang J, Yang H, Wu K, Xu X, Lee LJ. Xiong H, et al. Among authors: xu l, xu x. Gigascience. 2017 May 1;6(5):1-8. doi: 10.1093/gigascience/gix012. Gigascience. 2017. PMID: 28328004 Free PMC article.
Two distinct metacommunities characterize the gut microbiota in Crohn's disease patients.
He Q, Gao Y, Jie Z, Yu X, Laursen JM, Xiao L, Li Y, Li L, Zhang F, Feng Q, Li X, Yu J, Liu C, Lan P, Yan T, Liu X, Xu X, Yang H, Wang J, Madsen L, Brix S, Wang J, Kristiansen K, Jia H. He Q, et al. Among authors: xu x. Gigascience. 2017 Jul 1;6(7):1-11. doi: 10.1093/gigascience/gix050. Gigascience. 2017. PMID: 28655159 Free PMC article.
Deep whole-genome sequencing of 90 Han Chinese genomes.
Lan T, Lin H, Zhu W, Laurent TCAM, Yang M, Liu X, Wang J, Wang J, Yang H, Xu X, Guo X. Lan T, et al. Among authors: xu x. Gigascience. 2017 Sep 1;6(9):1-7. doi: 10.1093/gigascience/gix067. Gigascience. 2017. PMID: 28938720 Free PMC article.
Analyses of gut microbiota and plasma bile acids enable stratification of patients for antidiabetic treatment.
Gu Y, Wang X, Li J, Zhang Y, Zhong H, Liu R, Zhang D, Feng Q, Xie X, Hong J, Ren H, Liu W, Ma J, Su Q, Zhang H, Yang J, Wang X, Zhao X, Gu W, Bi Y, Peng Y, Xu X, Xia H, Li F, Xu X, Yang H, Xu G, Madsen L, Kristiansen K, Ning G, Wang W. Gu Y, et al. Among authors: xu g, xu x. Nat Commun. 2017 Nov 27;8(1):1785. doi: 10.1038/s41467-017-01682-2. Nat Commun. 2017. PMID: 29176714 Free PMC article. Clinical Trial.
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