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Construction of the third-generation Zea mays haplotype map.
Bukowski R, Guo X, Lu Y, Zou C, He B, Rong Z, Wang B, Xu D, Yang B, Xie C, Fan L, Gao S, Xu X, Zhang G, Li Y, Jiao Y, Doebley JF, Ross-Ibarra J, Lorant A, Buffalo V, Romay MC, Buckler ES, Ware D, Lai J, Sun Q, Xu Y. Bukowski R, et al. Among authors: xu d, xu x, xu y. Gigascience. 2018 Apr 1;7(4):1-12. doi: 10.1093/gigascience/gix134. Gigascience. 2018. PMID: 29300887 Free PMC article.
Genome-wide patterns of genetic variation among elite maize inbred lines.
Lai J, Li R, Xu X, Jin W, Xu M, Zhao H, Xiang Z, Song W, Ying K, Zhang M, Jiao Y, Ni P, Zhang J, Li D, Guo X, Ye K, Jian M, Wang B, Zheng H, Liang H, Zhang X, Wang S, Chen S, Li J, Fu Y, Springer NM, Yang H, Wang J, Dai J, Schnable PS, Wang J. Lai J, et al. Among authors: xu m, xu x. Nat Genet. 2010 Nov;42(11):1027-30. doi: 10.1038/ng.684. Epub 2010 Oct 24. Nat Genet. 2010. PMID: 20972441
Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential.
Zhang G, Liu X, Quan Z, Cheng S, Xu X, Pan S, Xie M, Zeng P, Yue Z, Wang W, Tao Y, Bian C, Han C, Xia Q, Peng X, Cao R, Yang X, Zhan D, Hu J, Zhang Y, Li H, Li H, Li N, Wang J, Wang C, Wang R, Guo T, Cai Y, Liu C, Xiang H, Shi Q, Huang P, Chen Q, Li Y, Wang J, Zhao Z, Wang J. Zhang G, et al. Among authors: xu x. Nat Biotechnol. 2012 May 13;30(6):549-54. doi: 10.1038/nbt.2195. Nat Biotechnol. 2012. PMID: 22580950
Maize HapMap2 identifies extant variation from a genome in flux.
Chia JM, Song C, Bradbury PJ, Costich D, de Leon N, Doebley J, Elshire RJ, Gaut B, Geller L, Glaubitz JC, Gore M, Guill KE, Holland J, Hufford MB, Lai J, Li M, Liu X, Lu Y, McCombie R, Nelson R, Poland J, Prasanna BM, Pyhäjärvi T, Rong T, Sekhon RS, Sun Q, Tenaillon MI, Tian F, Wang J, Xu X, Zhang Z, Kaeppler SM, Ross-Ibarra J, McMullen MD, Buckler ES, Zhang G, Xu Y, Ware D. Chia JM, et al. Among authors: xu x, xu y. Nat Genet. 2012 Jun 3;44(7):803-7. doi: 10.1038/ng.2313. Nat Genet. 2012. PMID: 22660545
Comparative population genomics of maize domestication and improvement.
Hufford MB, Xu X, van Heerwaarden J, Pyhäjärvi T, Chia JM, Cartwright RA, Elshire RJ, Glaubitz JC, Guill KE, Kaeppler SM, Lai J, Morrell PL, Shannon LM, Song C, Springer NM, Swanson-Wagner RA, Tiffin P, Wang J, Zhang G, Doebley J, McMullen MD, Ware D, Buckler ES, Yang S, Ross-Ibarra J. Hufford MB, et al. Among authors: xu x. Nat Genet. 2012 Jun 3;44(7):808-11. doi: 10.1038/ng.2309. Nat Genet. 2012. PMID: 22660546 Free PMC article.
Single-cell sequencing analysis characterizes common and cell-lineage-specific mutations in a muscle-invasive bladder cancer.
Li Y, Xu X, Song L, Hou Y, Li Z, Tsang S, Li F, Im KM, Wu K, Wu H, Ye X, Li G, Wang L, Zhang B, Liang J, Xie W, Wu R, Jiang H, Liu X, Yu C, Zheng H, Jian M, Nie L, Wan L, Shi M, Sun X, Tang A, Guo G, Gui Y, Cai Z, Li J, Wang W, Lu Z, Zhang X, Bolund L, Kristiansen K, Wang J, Yang H, Dean M, Wang J. Li Y, et al. Among authors: xu x. Gigascience. 2012 Aug 14;1(1):12. doi: 10.1186/2047-217X-1-12. Gigascience. 2012. PMID: 23587365 Free PMC article.
Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA.
Huerta-Sánchez E, Jin X, Asan, Bianba Z, Peter BM, Vinckenbosch N, Liang Y, Yi X, He M, Somel M, Ni P, Wang B, Ou X, Huasang, Luosang J, Cuo ZX, Li K, Gao G, Yin Y, Wang W, Zhang X, Xu X, Yang H, Li Y, Wang J, Wang J, Nielsen R. Huerta-Sánchez E, et al. Among authors: xu x. Nature. 2014 Aug 14;512(7513):194-7. doi: 10.1038/nature13408. Epub 2014 Jul 2. Nature. 2014. PMID: 25043035 Free PMC article.
Comparison of variations detection between whole-genome amplification methods used in single-cell resequencing.
Hou Y, Wu K, Shi X, Li F, Song L, Wu H, Dean M, Li G, Tsang S, Jiang R, Zhang X, Li B, Liu G, Bedekar N, Lu N, Xie G, Liang H, Chang L, Wang T, Chen J, Li Y, Zhang X, Yang H, Xu X, Wang L, Wang J. Hou Y, et al. Among authors: xu x. Gigascience. 2015 Aug 6;4:37. doi: 10.1186/s13742-015-0068-3. eCollection 2015. Gigascience. 2015. PMID: 26251698 Free PMC article.
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