Xie P - Search Results

1

SuperCT: a supervised-learning framework for enhanced characterization of single-cell transcriptomic profiles.

Xie P, Gao M, Wang C, Zhang J, Noel P, Yang C, Von Hoff D, Han H, Zhang MQ, Lin W. Xie P, et al. Nucleic Acids Res. 2019 May 7;47(8):e48. doi: 10.1093/nar/gkz116. Nucleic Acids Res. 2019. PMID: 30799483 Free PMC article.

2

MIROR: a method for cell-type specific microRNA occupancy rate prediction.

Xie P, Liu Y, Li Y, Zhang MQ, Wang X. Xie P, et al. Mol Biosyst. 2014 Jun;10(6):1377-84. doi: 10.1039/c3mb70610a. Epub 2014 Mar 25. Mol Biosyst. 2014. PMID: 24668253

3

Stochastic fluctuations can reveal the feedback signs of gene regulatory networks at the single-molecule level.

Jia C, Xie P, Chen M, Zhang MQ. Jia C, et al. Among authors: xie p. Sci Rep. 2017 Nov 22;7(1):16037. doi: 10.1038/s41598-017-15464-9. Sci Rep. 2017. PMID: 29167445 Free PMC article.

4

Global transcriptional activity dynamics reveal functional enhancer RNAs.

Kim YJ, Xie P, Cao L, Zhang MQ, Kim TH. Kim YJ, et al. Among authors: xie p. Genome Res. 2018 Dec;28(12):1799-1811. doi: 10.1101/gr.233486.117. Epub 2018 Oct 23. Genome Res. 2018. PMID: 30352805 Free PMC article.

5

Model-guided quantitative analysis of microRNA-mediated regulation on competing endogenous RNAs using a synthetic gene circuit.

Yuan Y, Liu B, Xie P, Zhang MQ, Li Y, Xie Z, Wang X. Yuan Y, et al. Among authors: xie z, xie p. Proc Natl Acad Sci U S A. 2015 Mar 10;112(10):3158-63. doi: 10.1073/pnas.1413896112. Epub 2015 Feb 23. Proc Natl Acad Sci U S A. 2015. PMID: 25713348 Free PMC article.

6

Hsa-miR-1246, hsa-miR-320a and hsa-miR-196b-5p inhibitors can reduce the cytotoxicity of Ebola virus glycoprotein in vitro.

Sheng M, Zhong Y, Chen Y, Du J, Ju X, Zhao C, Zhang G, Zhang L, Liu K, Yang N, Xie P, Li D, Zhang MQ, Jiang C. Sheng M, et al. Among authors: xie p. Sci China Life Sci. 2014 Oct;57(10):959-72. doi: 10.1007/s11427-014-4742-y. Epub 2014 Sep 13. Sci China Life Sci. 2014. PMID: 25218824

7

Histone Deacetylases Positively Regulate Transcription through the Elongation Machinery.

Greer CB, Tanaka Y, Kim YJ, Xie P, Zhang MQ, Park IH, Kim TH. Greer CB, et al. Among authors: xie p. Cell Rep. 2015 Nov 17;13(7):1444-1455. doi: 10.1016/j.celrep.2015.10.013. Epub 2015 Nov 5. Cell Rep. 2015. PMID: 26549458 Free PMC article.

8

FAT10 Is Critical in Influenza A Virus Replication by Inhibiting Type I IFN.

Zhang Y, Tang J, Yang N, Liu Q, Zhang Q, Zhang Y, Li N, Zhao Y, Li S, Liu S, Zhou H, Li X, Tian M, Deng J, Xie P, Sun Y, Lu H, Zhang MQ, Jin N, Jiang C. Zhang Y, et al. Among authors: xie p. J Immunol. 2016 Aug 1;197(3):824-33. doi: 10.4049/jimmunol.1501563. Epub 2016 Jun 27. J Immunol. 2016. PMID: 27354218

9

PAF1 regulation of promoter-proximal pause release via enhancer activation.

Chen FX, Xie P, Collings CK, Cao K, Aoi Y, Marshall SA, Rendleman EJ, Ugarenko M, Ozark PA, Zhang A, Shiekhattar R, Smith ER, Zhang MQ, Shilatifard A. Chen FX, et al. Among authors: xie p. Science. 2017 Sep 22;357(6357):1294-1298. doi: 10.1126/science.aan3269. Epub 2017 Aug 31. Science. 2017. PMID: 28860207 Free PMC article.

10

Avian influenza viruses suppress innate immunity by inducing trans-transcriptional readthrough via SSU72.

Zhao Y, Huang F, Zou Z, Bi Y, Yang Y, Zhang C, Liu Q, Shang D, Yan Y, Ju X, Mei S, Xie P, Li X, Tian M, Tan S, Lu H, Han Z, Liu K, Zhang Y, Liang J, Liang Z, Zhang Q, Chang J, Liu WJ, Feng C, Li T, Zhang MQ, Wang X, Gao GF, Liu Y, Jin N, Jiang C. Zhao Y, et al. Among authors: xie p. Cell Mol Immunol. 2022 Jun;19(6):702-714. doi: 10.1038/s41423-022-00843-8. Epub 2022 Mar 24. Cell Mol Immunol. 2022. PMID: 35332300 Free PMC article.

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