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The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.
Davis JJ, Wattam AR, Aziz RK, Brettin T, Butler R, Butler RM, Chlenski P, Conrad N, Dickerman A, Dietrich EM, Gabbard JL, Gerdes S, Guard A, Kenyon RW, Machi D, Mao C, Murphy-Olson D, Nguyen M, Nordberg EK, Olsen GJ, Olson RD, Overbeek JC, Overbeek R, Parrello B, Pusch GD, Shukla M, Thomas C, VanOeffelen M, Vonstein V, Warren AS, Xia F, Xie D, Yoo H, Stevens R. Davis JJ, et al. Among authors: xie d. Nucleic Acids Res. 2020 Jan 8;48(D1):D606-D612. doi: 10.1093/nar/gkz943. Nucleic Acids Res. 2020. PMID: 31667520 Free PMC article.
Data-driven scalable pipeline using national agent-based models for real-time pandemic response and decision support.
Bhattacharya P, Chen J, Hoops S, Machi D, Lewis B, Venkatramanan S, Wilson ML, Klahn B, Adiga A, Hurt B, Outten J, Adiga A, Warren A, Baek YY, Porebski P, Marathe A, Xie D, Swarup S, Vullikanti A, Mortveit H, Eubank S, Barrett CL, Marathe M. Bhattacharya P, et al. Among authors: xie d. Int J High Perform Comput Appl. 2023 Jan;37(1):4-27. doi: 10.1177/10943420221127034. Int J High Perform Comput Appl. 2023. PMID: 38603425 Free PMC article.
Evaluating the impact of international airline suspensions on the early global spread of COVID-19.
Adiga A, Venkatramanan S, Schlitt J, Peddireddy A, Dickerman A, Bura A, Warren A, Klahn BD, Mao C, Xie D, Machi D, Raymond E, Meng F, Barrow G, Mortveit H, Chen J, Walke J, Goldstein J, Wilson ML, Orr M, Porebski P, Telionis PA, Beckman R, Hoops S, Eubank S, Baek YY, Lewis B, Marathe M, Barrett C. Adiga A, et al. Among authors: xie d. medRxiv [Preprint]. 2020 Feb 23:2020.02.20.20025882. doi: 10.1101/2020.02.20.20025882. medRxiv. 2020. PMID: 32511466 Free PMC article. Preprint.
From 5Vs to 6Cs: Operationalizing Epidemic Data Management with COVID-19 Surveillance.
Peddireddy AS, Xie D, Patil P, Wilson ML, Machi D, Venkatramanan S, Klahn B, Porebski P, Bhattacharya P, Dumbre S, Raymond E, Marathe M. Peddireddy AS, et al. Among authors: xie d. medRxiv [Preprint]. 2020 Oct 31:2020.10.27.20220830. doi: 10.1101/2020.10.27.20220830. medRxiv. 2020. PMID: 33140060 Free PMC article. Preprint.
Effect of modelling slum populations on influenza spread in Delhi.
Chen J, Chu S, Chungbaek Y, Khan M, Kuhlman C, Marathe A, Mortveit H, Vullikanti A, Xie D. Chen J, et al. Among authors: xie d. BMJ Open. 2016 Sep 29;6(9):e011699. doi: 10.1136/bmjopen-2016-011699. BMJ Open. 2016. PMID: 27687898 Free PMC article.
Kava-induced dermatitis: A detailed histopathological analysis.
du Plessis Nisbet J, Xie D, Thompson R, Wark K, Lamrock E, Scurry J. du Plessis Nisbet J, et al. Among authors: xie d. Australas J Dermatol. 2024 May 20. doi: 10.1111/ajd.14305. Online ahead of print. Australas J Dermatol. 2024. PMID: 38764392
Predicting therapeutic response to neoadjuvant immunotherapy based on an integration model in resectable stage IIIA (N2) non-small cell lung cancer.
Xu L, Si H, Zhuang F, Li C, Zhang L, Zhao Y, Chen T, Dong Y, Wang T, Hou L, Hu T, Sun T, She Y, Hu X, Xie D, Wu J, Wu C, Zhao D, Chen C. Xu L, et al. Among authors: xie d. J Thorac Cardiovasc Surg. 2024 May 17:S0022-5223(24)00437-9. doi: 10.1016/j.jtcvs.2024.05.006. Online ahead of print. J Thorac Cardiovasc Surg. 2024. PMID: 38763304
5,130 results