Xi R - Search Results

1

Patient-derived tumor-like cell clusters for drug testing in cancer therapy.

Yin S, Xi R, Wu A, Wang S, Li Y, Wang C, Tang L, Xia Y, Yang D, Li J, Ye B, Yu Y, Wang J, Zhang H, Ren F, Zhang Y, Shen D, Wang L, Ying X, Li Z, Bu Z, Ji X, Gao X, Jia Y, Jia Z, Li N, Li Z, Ji JF, Xi JJ. Yin S, et al. Among authors: xi jj, xi r. Sci Transl Med. 2020 Jun 24;12(549):eaaz1723. doi: 10.1126/scitranslmed.aaz1723. Sci Transl Med. 2020. PMID: 32581131

2

Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants.

Xi R, Lee S, Xia Y, Kim TM, Park PJ. Xi R, et al. Nucleic Acids Res. 2016 Jul 27;44(13):6274-86. doi: 10.1093/nar/gkw491. Epub 2016 Jun 3. Nucleic Acids Res. 2016. PMID: 27260798 Free PMC article.

3

A microscopic landscape of the invasive breast cancer genome.

Ping Z, Xia Y, Shen T, Parekh V, Siegal GP, Eltoum IE, He J, Chen D, Deng M, Xi R, Shen D. Ping Z, et al. Among authors: xi r. Sci Rep. 2016 Jun 10;6:27545. doi: 10.1038/srep27545. Sci Rep. 2016. PMID: 27283966 Free PMC article.

4

Pysim-sv: a package for simulating structural variation data with GC-biases.

Xia Y, Liu Y, Deng M, Xi R. Xia Y, et al. Among authors: xi r. BMC Bioinformatics. 2017 Mar 14;18(Suppl 3):53. doi: 10.1186/s12859-017-1464-8. BMC Bioinformatics. 2017. PMID: 28361688 Free PMC article.

5

SVmine improves structural variation detection by integrative mining of predictions from multiple algorithms.

Xia Y, Liu Y, Deng M, Xi R. Xia Y, et al. Among authors: xi r. Bioinformatics. 2017 Nov 1;33(21):3348-3354. doi: 10.1093/bioinformatics/btx455. Bioinformatics. 2017. PMID: 29036467

6

Detecting virus integration sites based on multiple related sequencing data by VirTect.

Xia Y, Liu Y, Deng M, Xi R. Xia Y, et al. Among authors: xi r. BMC Med Genomics. 2019 Jan 31;12(Suppl 1):19. doi: 10.1186/s12920-018-0461-8. BMC Med Genomics. 2019. PMID: 30704462 Free PMC article.

7

Somatic mutations in renal cell carcinomas from Chinese patients revealed by targeted gene panel sequencing and their associations with prognosis and PD-L1 expression.

Wang J, Xi J, Zhang H, Li J, Xia Y, Xi R, Xi Z. Wang J, et al. Among authors: xi j, xi z, xi r. Cancer Commun (Lond). 2019 Jun 21;39(1):37. doi: 10.1186/s40880-019-0382-8. Cancer Commun (Lond). 2019. PMID: 31227023 Free PMC article. No abstract available.

8

CNV-BAC: Copy number Variation Detection in Bacterial Circular Genome.

Wu L, Wang H, Xia Y, Xi R. Wu L, et al. Among authors: xi r. Bioinformatics. 2020 Jun 1;36(12):3890-3891. doi: 10.1093/bioinformatics/btaa208. Bioinformatics. 2020. PMID: 32219377

9

Single-cell gene fusion detection by scFusion.

Jin Z, Huang W, Shen N, Li J, Wang X, Dong J, Park PJ, Xi R. Jin Z, et al. Among authors: xi r. Nat Commun. 2022 Feb 28;13(1):1084. doi: 10.1038/s41467-022-28661-6. Nat Commun. 2022. PMID: 35228538 Free PMC article.

10

TAGET: a toolkit for analyzing full-length transcripts from long-read sequencing.

Xia Y, Jin Z, Zhang C, Ouyang L, Dong Y, Li J, Guo L, Jing B, Shi Y, Miao S, Xi R. Xia Y, et al. Among authors: xi r. Nat Commun. 2023 Sep 23;14(1):5935. doi: 10.1038/s41467-023-41649-0. Nat Commun. 2023. PMID: 37741817 Free PMC article.

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