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A platform-independent framework for phenotyping of multiplex tissue imaging data.
Ahmadian M, Rickert C, Minic A, Wrobel J, Bitler BG, Xing F, Angelo M, Hsieh EWY, Ghosh D, Jordan KR. Ahmadian M, et al. Among authors: wrobel j. PLoS Comput Biol. 2023 Sep 21;19(9):e1011432. doi: 10.1371/journal.pcbi.1011432. eCollection 2023 Sep. PLoS Comput Biol. 2023. PMID: 37733781 Free PMC article.
Cancer Cell-Specific Major Histocompatibility Complex II Expression as a Determinant of the Immune Infiltrate Organization and Function in the NSCLC Tumor Microenvironment.
Johnson AM, Boland JM, Wrobel J, Klezcko EK, Weiser-Evans M, Hopp K, Heasley L, Clambey ET, Jordan K, Nemenoff RA, Schenk EL. Johnson AM, et al. Among authors: wrobel j. J Thorac Oncol. 2021 Oct;16(10):1694-1704. doi: 10.1016/j.jtho.2021.05.004. Epub 2021 May 25. J Thorac Oncol. 2021. PMID: 34048945 Free PMC article.
mxnorm: An R Package to Normalize Multiplexed Imaging Data.
Harris C, Wrobel J, Vandekar S. Harris C, et al. Among authors: wrobel j. J Open Source Softw. 2022;7(71):4180. doi: 10.21105/joss.04180. Epub 2022 Mar 30. J Open Source Softw. 2022. PMID: 36017308 Free PMC article.
Intensity warping for multisite MRI harmonization.
Wrobel J, Martin ML, Bakshi R, Calabresi PA, Elliot M, Roalf D, Gur RC, Gur RE, Henry RG, Nair G, Oh J, Papinutto N, Pelletier D, Reich DS, Rooney WD, Satterthwaite TD, Stern W, Prabhakaran K, Sicotte NL, Shinohara RT, Goldsmith J; NAIMS Cooperative. Wrobel J, et al. Neuroimage. 2020 Dec;223:117242. doi: 10.1016/j.neuroimage.2020.117242. Epub 2020 Aug 14. Neuroimage. 2020. PMID: 32798678 Free PMC article.
431 results