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A Visual Language for Protein Design.
Cox RS 3rd, McLaughlin JA, Grünberg R, Beal J, Wipat A, Sauro HM. Cox RS 3rd, et al. Among authors: wipat a. ACS Synth Biol. 2017 Jul 21;6(7):1120-1123. doi: 10.1021/acssynbio.6b00286. Epub 2017 Mar 7. ACS Synth Biol. 2017. PMID: 28173698 Free article.
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology.
Galdzicki M, Clancy KP, Oberortner E, Pocock M, Quinn JY, Rodriguez CA, Roehner N, Wilson ML, Adam L, Anderson JC, Bartley BA, Beal J, Chandran D, Chen J, Densmore D, Endy D, Grünberg R, Hallinan J, Hillson NJ, Johnson JD, Kuchinsky A, Lux M, Misirli G, Peccoud J, Plahar HA, Sirin E, Stan GB, Villalobos A, Wipat A, Gennari JH, Myers CJ, Sauro HM. Galdzicki M, et al. Among authors: wipat a. Nat Biotechnol. 2014 Jun;32(6):545-50. doi: 10.1038/nbt.2891. Epub 2014 Jun 6. Nat Biotechnol. 2014. PMID: 24911500
Synthetic Biology Open Language (SBOL) Version 2.0.0.
Bartley B, Beal J, Clancy K, Misirli G, Roehner N, Oberortner E, Pocock M, Bissell M, Madsen C, Nguyen T, Zhang Z, Gennari JH, Myers C, Wipat A, Sauro H. Bartley B, et al. Among authors: wipat a. J Integr Bioinform. 2015 Sep 4;12(2):272. doi: 10.2390/biecoll-jib-2015-272. J Integr Bioinform. 2015. PMID: 26528570
SBOL Visual: A Graphical Language for Genetic Designs.
Quinn JY, Cox RS 3rd, Adler A, Beal J, Bhatia S, Cai Y, Chen J, Clancy K, Galdzicki M, Hillson NJ, Le Novère N, Maheshwari AJ, McLaughlin JA, Myers CJ, P U, Pocock M, Rodriguez C, Soldatova L, Stan GB, Swainston N, Wipat A, Sauro HM. Quinn JY, et al. Among authors: wipat a. PLoS Biol. 2015 Dec 3;13(12):e1002310. doi: 10.1371/journal.pbio.1002310. eCollection 2015 Dec. PLoS Biol. 2015. PMID: 26633141 Free PMC article.
Data Integration and Mining for Synthetic Biology Design.
Mısırlı G, Hallinan J, Pocock M, Lord P, McLaughlin JA, Sauro H, Wipat A. Mısırlı G, et al. Among authors: wipat a. ACS Synth Biol. 2016 Oct 21;5(10):1086-1097. doi: 10.1021/acssynbio.5b00295. Epub 2016 Jun 20. ACS Synth Biol. 2016. PMID: 27110921 Free article.
Sharing Structure and Function in Biological Design with SBOL 2.0.
Roehner N, Beal J, Clancy K, Bartley B, Misirli G, Grünberg R, Oberortner E, Pocock M, Bissell M, Madsen C, Nguyen T, Zhang M, Zhang Z, Zundel Z, Densmore D, Gennari JH, Wipat A, Sauro HM, Myers CJ. Roehner N, et al. Among authors: wipat a. ACS Synth Biol. 2016 Jun 17;5(6):498-506. doi: 10.1021/acssynbio.5b00215. Epub 2016 May 4. ACS Synth Biol. 2016. PMID: 27111421
121 results