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Domain generalization across tumor types, laboratories, and species - Insights from the 2022 edition of the Mitosis Domain Generalization Challenge.
Aubreville M, Stathonikos N, Donovan TA, Klopfleisch R, Ammeling J, Ganz J, Wilm F, Veta M, Jabari S, Eckstein M, Annuscheit J, Krumnow C, Bozaba E, Çayır S, Gu H, Chen X', Jahanifar M, Shephard A, Kondo S, Kasai S, Kotte S, Saipradeep VG, Lafarge MW, Koelzer VH, Wang Z, Zhang Y, Yang S, Wang X, Breininger K, Bertram CA. Aubreville M, et al. Among authors: wilm f. Med Image Anal. 2024 May;94:103155. doi: 10.1016/j.media.2024.103155. Epub 2024 Mar 22. Med Image Anal. 2024. PMID: 38537415 Free article.
Automated diagnosis of 7 canine skin tumors using machine learning on H&E-stained whole slide images.
Fragoso-Garcia M, Wilm F, Bertram CA, Merz S, Schmidt A, Donovan T, Fuchs-Baumgartinger A, Bartel A, Marzahl C, Diehl L, Puget C, Maier A, Aubreville M, Breininger K, Klopfleisch R. Fragoso-Garcia M, et al. Among authors: wilm f. Vet Pathol. 2023 Nov;60(6):865-875. doi: 10.1177/03009858231189205. Epub 2023 Jul 29. Vet Pathol. 2023. PMID: 37515411 Free PMC article.
A comprehensive multi-domain dataset for mitotic figure detection.
Aubreville M, Wilm F, Stathonikos N, Breininger K, Donovan TA, Jabari S, Veta M, Ganz J, Ammeling J, van Diest PJ, Klopfleisch R, Bertram CA. Aubreville M, et al. Among authors: wilm f. Sci Data. 2023 Jul 25;10(1):484. doi: 10.1038/s41597-023-02327-4. Sci Data. 2023. PMID: 37491536 Free PMC article.
Mitosis domain generalization in histopathology images - The MIDOG challenge.
Aubreville M, Stathonikos N, Bertram CA, Klopfleisch R, Ter Hoeve N, Ciompi F, Wilm F, Marzahl C, Donovan TA, Maier A, Breen J, Ravikumar N, Chung Y, Park J, Nateghi R, Pourakpour F, Fick RHJ, Ben Hadj S, Jahanifar M, Shephard A, Dexl J, Wittenberg T, Kondo S, Lafarge MW, Koelzer VH, Liang J, Wang Y, Long X, Liu J, Razavi S, Khademi A, Yang S, Wang X, Erber R, Klang A, Lipnik K, Bolfa P, Dark MJ, Wasinger G, Veta M, Breininger K. Aubreville M, et al. Among authors: wilm f. Med Image Anal. 2023 Feb;84:102699. doi: 10.1016/j.media.2022.102699. Epub 2022 Nov 23. Med Image Anal. 2023. PMID: 36463832 Free article.
Pan-tumor CAnine cuTaneous Cancer Histology (CATCH) dataset.
Wilm F, Fragoso M, Marzahl C, Qiu J, Puget C, Diehl L, Bertram CA, Klopfleisch R, Maier A, Breininger K, Aubreville M. Wilm F, et al. Sci Data. 2022 Sep 27;9(1):588. doi: 10.1038/s41597-022-01692-w. Sci Data. 2022. PMID: 36167846 Free PMC article.
Computer-assisted mitotic count using a deep learning-based algorithm improves interobserver reproducibility and accuracy.
Bertram CA, Aubreville M, Donovan TA, Bartel A, Wilm F, Marzahl C, Assenmacher CA, Becker K, Bennett M, Corner S, Cossic B, Denk D, Dettwiler M, Gonzalez BG, Gurtner C, Haverkamp AK, Heier A, Lehmbecker A, Merz S, Noland EL, Plog S, Schmidt A, Sebastian F, Sledge DG, Smedley RC, Tecilla M, Thaiwong T, Fuchs-Baumgartinger A, Meuten DJ, Breininger K, Kiupel M, Maier A, Klopfleisch R. Bertram CA, et al. Among authors: wilm f. Vet Pathol. 2022 Mar;59(2):211-226. doi: 10.1177/03009858211067478. Epub 2021 Dec 30. Vet Pathol. 2022. PMID: 34965805 Free PMC article.