Westholm JO - Search Results

1

Heterogeneity and interplay of the extracellular vesicle small RNA transcriptome and proteome.

Sork H, Corso G, Krjutskov K, Johansson HJ, Nordin JZ, Wiklander OPB, Lee YXF, Westholm JO, Lehtiö J, Wood MJA, Mäger I, El Andaloussi S. Sork H, et al. Among authors: westholm jo. Sci Rep. 2018 Jul 17;8(1):10813. doi: 10.1038/s41598-018-28485-9. Sci Rep. 2018. PMID: 30018314 Free PMC article.

2

Comprehensive RNA-Sequencing Analysis in Serum and Muscle Reveals Novel Small RNA Signatures with Biomarker Potential for DMD.

Coenen-Stass AML, Sork H, Gatto S, Godfrey C, Bhomra A, Krjutškov K, Hart JR, Westholm JO, O'Donovan L, Roos A, Lochmüller H, Puri PL, El Andaloussi S, Wood MJA, Roberts TC. Coenen-Stass AML, et al. Among authors: westholm jo. Mol Ther Nucleic Acids. 2018 Dec 7;13:1-15. doi: 10.1016/j.omtn.2018.08.005. Epub 2018 Aug 17. Mol Ther Nucleic Acids. 2018. PMID: 30219269 Free PMC article.

3

Expression profiling and in situ screening of circular RNAs in human tissues.

Zaghlool A, Ameur A, Wu C, Westholm JO, Niazi A, Manivannan M, Bramlett K, Nilsson M, Feuk L. Zaghlool A, et al. Among authors: westholm jo. Sci Rep. 2018 Nov 16;8(1):16953. doi: 10.1038/s41598-018-35001-6. Sci Rep. 2018. PMID: 30446675 Free PMC article.

4

Characterization of the nuclear and cytosolic transcriptomes in human brain tissue reveals new insights into the subcellular distribution of RNA transcripts.

Zaghlool A, Niazi A, Björklund ÅK, Westholm JO, Ameur A, Feuk L. Zaghlool A, et al. Among authors: westholm jo. Sci Rep. 2021 Feb 18;11(1):4076. doi: 10.1038/s41598-021-83541-1. Sci Rep. 2021. PMID: 33603054 Free PMC article.

5

Visualization and analysis of gene expression in tissue sections by spatial transcriptomics.

Ståhl PL, Salmén F, Vickovic S, Lundmark A, Navarro JF, Magnusson J, Giacomello S, Asp M, Westholm JO, Huss M, Mollbrink A, Linnarsson S, Codeluppi S, Borg Å, Pontén F, Costea PI, Sahlén P, Mulder J, Bergmann O, Lundeberg J, Frisén J. Ståhl PL, et al. Among authors: westholm jo. Science. 2016 Jul 1;353(6294):78-82. doi: 10.1126/science.aaf2403. Science. 2016. PMID: 27365449

6

Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines.

Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC. Wen J, et al. Among authors: westholm jo. Genome Res. 2014 Jul;24(7):1236-50. doi: 10.1101/gr.161554.113. Genome Res. 2014. PMID: 24985917 Free PMC article.

7

Endocan is a VEGF-A and PI3K regulated gene with increased expression in human renal cancer.

Rennel E, Mellberg S, Dimberg A, Petersson L, Botling J, Ameur A, Westholm JO, Komorowski J, Lassalle P, Cross MJ, Gerwins P. Rennel E, et al. Among authors: westholm jo. Exp Cell Res. 2007 Apr 15;313(7):1285-94. doi: 10.1016/j.yexcr.2007.01.021. Epub 2007 Feb 6. Exp Cell Res. 2007. PMID: 17362927

8

Global gene expression analysis by combinatorial optimization.

Ameur A, Aurell E, Carlsson M, Westholm JO. Ameur A, et al. Among authors: westholm jo. In Silico Biol. 2004;4(2):225-41. In Silico Biol. 2004. PMID: 15107026

9

Combinatorial control of gene expression by the three yeast repressors Mig1, Mig2 and Mig3.

Westholm JO, Nordberg N, Murén E, Ameur A, Komorowski J, Ronne H. Westholm JO, et al. BMC Genomics. 2008 Dec 16;9:601. doi: 10.1186/1471-2164-9-601. BMC Genomics. 2008. PMID: 19087243 Free PMC article.

10

Transcriptional profiling reveals a critical role for tyrosine phosphatase VE-PTP in regulation of VEGFR2 activity and endothelial cell morphogenesis.

Mellberg S, Dimberg A, Bahram F, Hayashi M, Rennel E, Ameur A, Westholm JO, Larsson E, Lindahl P, Cross MJ, Claesson-Welsh L. Mellberg S, et al. Among authors: westholm jo. FASEB J. 2009 May;23(5):1490-502. doi: 10.1096/fj.08-123810. Epub 2009 Jan 9. FASEB J. 2009. PMID: 19136612

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