Weinberger A - Search Results

1

Phage display sequencing reveals that genetic, environmental, and intrinsic factors influence variation of human antibody epitope repertoire.

Andreu-Sánchez S, Bourgonje AR, Vogl T, Kurilshikov A, Leviatan S, Ruiz-Moreno AJ, Hu S, Sinha T, Vich Vila A, Klompus S, Kalka IN, de Leeuw K, Arends S, Jonkers I, Withoff S; Lifelines Cohort Study; Brouwer E, Weinberger A, Wijmenga C, Segal E, Weersma RK, Fu J, Zhernakova A. Andreu-Sánchez S, et al. Among authors: weinberger a. Immunity. 2023 Jun 13;56(6):1376-1392.e8. doi: 10.1016/j.immuni.2023.04.003. Epub 2023 May 9. Immunity. 2023. PMID: 37164013

2

Compensation for differences in gene copy number among yeast ribosomal proteins is encoded within their promoters.

Zeevi D, Sharon E, Lotan-Pompan M, Lubling Y, Shipony Z, Raveh-Sadka T, Keren L, Levo M, Weinberger A, Segal E. Zeevi D, et al. Among authors: weinberger a. Genome Res. 2011 Dec;21(12):2114-28. doi: 10.1101/gr.119669.110. Epub 2011 Oct 18. Genome Res. 2011. PMID: 22009988 Free PMC article.

3

Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters.

Sharon E, Kalma Y, Sharp A, Raveh-Sadka T, Levo M, Zeevi D, Keren L, Yakhini Z, Weinberger A, Segal E. Sharon E, et al. Among authors: weinberger a. Nat Biotechnol. 2012 May 20;30(6):521-30. doi: 10.1038/nbt.2205. Nat Biotechnol. 2012. PMID: 22609971 Free PMC article.

4

Two DNA-encoded strategies for increasing expression with opposing effects on promoter dynamics and transcriptional noise.

Dadiani M, van Dijk D, Segal B, Field Y, Ben-Artzi G, Raveh-Sadka T, Levo M, Kaplow I, Weinberger A, Segal E. Dadiani M, et al. Among authors: weinberger a. Genome Res. 2013 Jun;23(6):966-76. doi: 10.1101/gr.149096.112. Epub 2013 Feb 12. Genome Res. 2013. PMID: 23403035 Free PMC article.

5

Measurements of the impact of 3' end sequences on gene expression reveal wide range and sequence dependent effects.

Shalem O, Carey L, Zeevi D, Sharon E, Keren L, Weinberger A, Dahan O, Pilpel Y, Segal E. Shalem O, et al. Among authors: weinberger a. PLoS Comput Biol. 2013;9(3):e1002934. doi: 10.1371/journal.pcbi.1002934. Epub 2013 Mar 7. PLoS Comput Biol. 2013. PMID: 23505350 Free PMC article.

6

Deciphering the rules by which 5'-UTR sequences affect protein expression in yeast.

Dvir S, Velten L, Sharon E, Zeevi D, Carey LB, Weinberger A, Segal E. Dvir S, et al. Among authors: weinberger a. Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):E2792-801. doi: 10.1073/pnas.1222534110. Epub 2013 Jul 5. Proc Natl Acad Sci U S A. 2013. PMID: 23832786 Free PMC article.

7

Molecular dissection of the genetic mechanisms that underlie expression conservation in orthologous yeast ribosomal promoters.

Zeevi D, Lubliner S, Lotan-Pompan M, Hodis E, Vesterman R, Weinberger A, Segal E. Zeevi D, et al. Among authors: weinberger a. Genome Res. 2014 Dec;24(12):1991-9. doi: 10.1101/gr.179259.114. Epub 2014 Oct 7. Genome Res. 2014. PMID: 25294245 Free PMC article.

8

Unraveling determinants of transcription factor binding outside the core binding site.

Levo M, Zalckvar E, Sharon E, Dantas Machado AC, Kalma Y, Lotam-Pompan M, Weinberger A, Yakhini Z, Rohs R, Segal E. Levo M, et al. Among authors: weinberger a. Genome Res. 2015 Jul;25(7):1018-29. doi: 10.1101/gr.185033.114. Epub 2015 Mar 11. Genome Res. 2015. PMID: 25762553 Free PMC article.

9

Core promoter sequence in yeast is a major determinant of expression level.

Lubliner S, Regev I, Lotan-Pompan M, Edelheit S, Weinberger A, Segal E. Lubliner S, et al. Among authors: weinberger a. Genome Res. 2015 Jul;25(7):1008-17. doi: 10.1101/gr.188193.114. Epub 2015 May 12. Genome Res. 2015. PMID: 25969468 Free PMC article.

10

Noise in gene expression is coupled to growth rate.

Keren L, van Dijk D, Weingarten-Gabbay S, Davidi D, Jona G, Weinberger A, Milo R, Segal E. Keren L, et al. Among authors: weinberger a. Genome Res. 2015 Dec;25(12):1893-902. doi: 10.1101/gr.191635.115. Epub 2015 Sep 9. Genome Res. 2015. PMID: 26355006 Free PMC article.

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