Wei Z - Search Results

1

Paneth Cell-Derived Lysozyme Defines the Composition of Mucolytic Microbiota and the Inflammatory Tone of the Intestine.

Yu S, Balasubramanian I, Laubitz D, Tong K, Bandyopadhyay S, Lin X, Flores J, Singh R, Liu Y, Macazana C, Zhao Y, Béguet-Crespel F, Patil K, Midura-Kiela MT, Wang D, Yap GS, Ferraris RP, Wei Z, Bonder EM, Häggblom MM, Zhang L, Douard V, Verzi MP, Cadwell K, Kiela PR, Gao N. Yu S, et al. Among authors: wei z. Immunity. 2020 Aug 18;53(2):398-416.e8. doi: 10.1016/j.immuni.2020.07.010. Immunity. 2020. PMID: 32814028 Free PMC article.

2

Model-based deep embedding for constrained clustering analysis of single cell RNA-seq data.

Tian T, Zhang J, Lin X, Wei Z, Hakonarson H. Tian T, et al. Among authors: wei z. Nat Commun. 2021 Mar 25;12(1):1873. doi: 10.1038/s41467-021-22008-3. Nat Commun. 2021. PMID: 33767149 Free PMC article.

3

An active learning approach for clustering single-cell RNA-seq data.

Lin X, Liu H, Wei Z, Roy SB, Gao N. Lin X, et al. Among authors: wei z. Lab Invest. 2022 Mar;102(3):227-235. doi: 10.1038/s41374-021-00639-w. Epub 2021 Jul 9. Lab Invest. 2022. PMID: 34244616 Free PMC article.

4

Colonic healing requires Wnt produced by epithelium as well as Tagln+ and Acta2+ stromal cells.

Das S, Feng Q, Balasubramanian I, Lin X, Liu H, Pellón-Cardenas O, Yu S, Zhang X, Liu Y, Wei Z, Bonder EM, Verzi MP, Hsu W, Zhang L, Wang TC, Gao N. Das S, et al. Among authors: wei z. Development. 2022 Jan 1;149(1):dev199587. doi: 10.1242/dev.199587. Epub 2022 Jan 12. Development. 2022. PMID: 34910127 Free PMC article.

5

Clustering of single-cell multi-omics data with a multimodal deep learning method.

Lin X, Tian T, Wei Z, Hakonarson H. Lin X, et al. Among authors: wei z. Nat Commun. 2022 Dec 13;13(1):7705. doi: 10.1038/s41467-022-35031-9. Nat Commun. 2022. PMID: 36513636 Free PMC article.

6

Complex hierarchical structures in single-cell genomics data unveiled by deep hyperbolic manifold learning.

Tian T, Zhong C, Lin X, Wei Z, Hakonarson H. Tian T, et al. Among authors: wei z. Genome Res. 2023 Feb;33(2):232-246. doi: 10.1101/gr.277068.122. Epub 2023 Feb 27. Genome Res. 2023. PMID: 36849204 Free PMC article.

7

The virome of HPV-positive tonsil squamous cell carcinoma and neck metastasis.

Carey RM, Rajasekaran K, Seckar T, Lin X, Wei Z, Tong CCL, Ranasinghe VJ, Newman JG, O'Malley BW Jr, Weinstein GS, Feldman MD, Robertson ES. Carey RM, et al. Among authors: wei z. Oncotarget. 2020 Jan 21;11(3):282-293. doi: 10.18632/oncotarget.27436. eCollection 2020 Jan 21. Oncotarget. 2020. PMID: 32076488 Free PMC article.

8

Regulation of Janus Kinase 2 by an Inflammatory Bowel Disease Causal Non-coding Single Nucleotide Polymorphism.

Cardinale CJ, March ME, Lin X, Liu Y, Spruce LA, Bradfield JP, Wei Z, Seeholzer SH, Grant SFA, Hakonarson H. Cardinale CJ, et al. Among authors: wei z. J Crohns Colitis. 2020 Jun 19;14(5):646-653. doi: 10.1093/ecco-jcc/jjz213. J Crohns Colitis. 2020. PMID: 32271392

9

Detection of Microbial Agents in Oropharyngeal and Nasopharyngeal Samples of SARS-CoV-2 Patients.

Seckar T, Lin X, Bose D, Wei Z, Rohrbaugh J, Collman RG, Robertson ES. Seckar T, et al. Among authors: wei z. Front Microbiol. 2021 Mar 9;12:637202. doi: 10.3389/fmicb.2021.637202. eCollection 2021. Front Microbiol. 2021. PMID: 33790878 Free PMC article.

10

The microbiome of HPV-positive tonsil squamous cell carcinoma and neck metastasis.

Rajasekaran K, Carey RM, Lin X, Seckar TD, Wei Z, Chorath K, Newman JG, O'Malley BW, Weinstein GS, Feldman MD, Robertson E. Rajasekaran K, et al. Among authors: wei z. Oral Oncol. 2021 Jun;117:105305. doi: 10.1016/j.oraloncology.2021.105305. Epub 2021 Apr 24. Oral Oncol. 2021. PMID: 33905914

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