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Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR.
Waterhouse RM, Adam-Blondon AF, Agosti D, Baldrian P, Balech B, Corre E, Davey RP, Lantz H, Pesole G, Quast C, Glöckner FO, Raes N, Sandionigi A, Santamaria M, Addink W, Vohradsky J, Nunes-Jorge A, Willassen NP, Lanfear J. Waterhouse RM, et al. F1000Res. 2021 Dec 3;10:ELIXIR-1238. doi: 10.12688/f1000research.73825.2. eCollection 2021. F1000Res. 2021. PMID: 35999898 Free PMC article.
The era of reference genomes in conservation genomics.
Formenti G, Theissinger K, Fernandes C, Bista I, Bombarely A, Bleidorn C, Ciofi C, Crottini A, Godoy JA, Höglund J, Malukiewicz J, Mouton A, Oomen RA, Paez S, Palsbøll PJ, Pampoulie C, Ruiz-López MJ, Svardal H, Theofanopoulou C, de Vries J, Waldvogel AM, Zhang G, Mazzoni CJ, Jarvis ED, Bálint M; European Reference Genome Atlas (ERGA) Consortium. Formenti G, et al. Trends Ecol Evol. 2022 Mar;37(3):197-202. doi: 10.1016/j.tree.2021.11.008. Epub 2022 Jan 24. Trends Ecol Evol. 2022. PMID: 35086739 Free article.
DrosOMA: the Drosophila Orthologous Matrix browser.
Thiébaut A, Altenhoff AM, Campli G, Glover N, Dessimoz C, Waterhouse RM. Thiébaut A, et al. Among authors: waterhouse rm. F1000Res. 2024 Jan 16;12:936. doi: 10.12688/f1000research.135250.2. eCollection 2023. F1000Res. 2024. PMID: 38434623 Free PMC article.
Using BUSCO to Assess Insect Genomic Resources.
Waterhouse RM, Seppey M, Simão FA, Zdobnov EM. Waterhouse RM, et al. Methods Mol Biol. 2019;1858:59-74. doi: 10.1007/978-1-4939-8775-7_6. Methods Mol Biol. 2019. PMID: 30414111
Exploring new genomic territories with emerging model insects.
Feron R, Waterhouse RM. Feron R, et al. Among authors: waterhouse rm. Curr Opin Insect Sci. 2022 Jun;51:100902. doi: 10.1016/j.cois.2022.100902. Epub 2022 Mar 14. Curr Opin Insect Sci. 2022. PMID: 35301165 Free article. Review.
Of Genes and Genomes: Mosquito Evolution and Diversity.
Ruzzante L, Reijnders MJMF, Waterhouse RM. Ruzzante L, et al. Among authors: waterhouse rm. Trends Parasitol. 2019 Jan;35(1):32-51. doi: 10.1016/j.pt.2018.10.003. Epub 2018 Nov 1. Trends Parasitol. 2019. PMID: 30391118 Free article. Review.
Summary Visualizations of Gene Ontology Terms With GO-Figure!
Reijnders MJMF, Waterhouse RM. Reijnders MJMF, et al. Among authors: waterhouse rm. Front Bioinform. 2021 Apr 1;1:638255. doi: 10.3389/fbinf.2021.638255. eCollection 2021. Front Bioinform. 2021. PMID: 36303779 Free PMC article.
The Novel Evolution of the Sperm Whale Genome.
Warren WC, Kuderna L, Alexander A, Catchen J, Pérez-Silva JG, López-Otín C, Quesada V, Minx P, Tomlinson C, Montague MJ, Farias FHG, Walter RB, Marques-Bonet T, Glenn T, Kieran TJ, Wise SS, Wise JP Jr, Waterhouse RM, Wise JP Sr. Warren WC, et al. Among authors: waterhouse rm. Genome Biol Evol. 2017 Dec 1;9(12):3260-3264. doi: 10.1093/gbe/evx187. Genome Biol Evol. 2017. PMID: 28985367 Free PMC article.
102 results