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The genomes of four tapeworm species reveal adaptations to parasitism.
Tsai IJ, Zarowiecki M, Holroyd N, Garciarrubio A, Sánchez-Flores A, Brooks KL, Tracey A, Bobes RJ, Fragoso G, Sciutto E, Aslett M, Beasley H, Bennett HM, Cai X, Camicia F, Clark R, Cucher M, De Silva N, Day TA, Deplazes P, Estrada K, Fernández C, Holland PWH, Hou J, Hu S, Huckvale T, Hung SS, Kamenetzky L, Keane JA, Kiss F, Koziol U, Lambert O, Liu K, Luo X, Luo Y, Macchiaroli N, Nichol S, Paps J, Parkinson J, Pouchkina-Stantcheva N, Riddiford N, Rosenzvit M, Salinas G, Wasmuth JD, Zamanian M, Zheng Y; Taenia solium Genome Consortium; Cai J, Soberón X, Olson PD, Laclette JP, Brehm K, Berriman M. Tsai IJ, et al. Among authors: wasmuth jd. Nature. 2013 Apr 4;496(7443):57-63. doi: 10.1038/nature12031. Epub 2013 Mar 13. Nature. 2013. PMID: 23485966 Free PMC article.
The origins of apicomplexan sequence innovation.
Wasmuth J, Daub J, Peregrín-Alvarez JM, Finney CA, Parkinson J. Wasmuth J, et al. Genome Res. 2009 Jul;19(7):1202-13. doi: 10.1101/gr.083386.108. Epub 2009 Apr 10. Genome Res. 2009. PMID: 19363216 Free PMC article.
The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery.
Laing R, Kikuchi T, Martinelli A, Tsai IJ, Beech RN, Redman E, Holroyd N, Bartley DJ, Beasley H, Britton C, Curran D, Devaney E, Gilabert A, Hunt M, Jackson F, Johnston SL, Kryukov I, Li K, Morrison AA, Reid AJ, Sargison N, Saunders GI, Wasmuth JD, Wolstenholme A, Berriman M, Gilleard JS, Cotton JA. Laing R, et al. Among authors: wasmuth jd. Genome Biol. 2013 Aug 28;14(8):R88. doi: 10.1186/gb-2013-14-8-r88. Genome Biol. 2013. PMID: 23985316 Free PMC article.
Improved enzyme annotation with EC-specific cutoffs using DETECT v2.
Nursimulu N, Xu LL, Wasmuth JD, Krukov I, Parkinson J. Nursimulu N, et al. Among authors: wasmuth jd. Bioinformatics. 2018 Oct 1;34(19):3393-3395. doi: 10.1093/bioinformatics/bty368. Bioinformatics. 2018. PMID: 29722785 Free PMC article.
PartiGene--constructing partial genomes.
Parkinson J, Anthony A, Wasmuth J, Schmid R, Hedley A, Blaxter M. Parkinson J, et al. Bioinformatics. 2004 Jun 12;20(9):1398-404. doi: 10.1093/bioinformatics/bth101. Epub 2004 Feb 26. Bioinformatics. 2004. PMID: 14988115
48 results