Wang T - Search Results

1

TSUNAMI: Translational Bioinformatics Tool Suite for Network Analysis and Mining.

Huang Z, Han Z, Wang T, Shao W, Xiang S, Salama P, Rizkalla M, Huang K, Zhang J. Huang Z, et al. Among authors: wang t. Genomics Proteomics Bioinformatics. 2021 Dec;19(6):1023-1031. doi: 10.1016/j.gpb.2019.05.006. Epub 2021 Mar 8. Genomics Proteomics Bioinformatics. 2021. PMID: 33705981 Free PMC article.

2

Topological Methods for Visualization and Analysis of High Dimensional Single-Cell RNA Sequencing Data.

Wang T, Johnson T, Zhang J, Huang K. Wang T, et al. Pac Symp Biocomput. 2019;24:350-361. Pac Symp Biocomput. 2019. PMID: 30963074 Free PMC article.

3

LAmbDA: label ambiguous domain adaptation dataset integration reduces batch effects and improves subtype detection.

Johnson TS, Wang T, Huang Z, Yu CY, Wu Y, Han Y, Zhang Y, Huang K, Zhang J. Johnson TS, et al. Among authors: wang t. Bioinformatics. 2019 Nov 1;35(22):4696-4706. doi: 10.1093/bioinformatics/btz295. Bioinformatics. 2019. PMID: 31038689 Free PMC article.

4

Generalized gene co-expression analysis via subspace clustering using low-rank representation.

Wang T, Zhang J, Huang K. Wang T, et al. BMC Bioinformatics. 2019 May 1;20(Suppl 7):196. doi: 10.1186/s12859-019-2733-5. BMC Bioinformatics. 2019. PMID: 31074376 Free PMC article.

5

Integrative Analysis of Pathological Images and Multi-Dimensional Genomic Data for Early-Stage Cancer Prognosis.

Shao W, Han Z, Cheng J, Cheng L, Wang T, Sun L, Lu Z, Zhang J, Zhang D, Huang K. Shao W, et al. Among authors: wang t. IEEE Trans Med Imaging. 2020 Jan;39(1):99-110. doi: 10.1109/TMI.2019.2920608. Epub 2019 Jun 3. IEEE Trans Med Imaging. 2020. PMID: 31170067

6

BERMUDA: a novel deep transfer learning method for single-cell RNA sequencing batch correction reveals hidden high-resolution cellular subtypes.

Wang T, Johnson TS, Shao W, Lu Z, Helm BR, Zhang J, Huang K. Wang T, et al. Genome Biol. 2019 Aug 12;20(1):165. doi: 10.1186/s13059-019-1764-6. Genome Biol. 2019. PMID: 31405383 Free PMC article.

7

Multi-task multi-modal learning for joint diagnosis and prognosis of human cancers.

Shao W, Wang T, Sun L, Dong T, Han Z, Huang Z, Zhang J, Zhang D, Huang K. Shao W, et al. Among authors: wang t. Med Image Anal. 2020 Oct;65:101795. doi: 10.1016/j.media.2020.101795. Epub 2020 Jul 23. Med Image Anal. 2020. PMID: 32745975

8

Development and interpretation of a pathomics-based model for the prediction of microsatellite instability in Colorectal Cancer.

Cao R, Yang F, Ma SC, Liu L, Zhao Y, Li Y, Wu DH, Wang T, Lu WJ, Cai WJ, Zhu HB, Guo XJ, Lu YW, Kuang JJ, Huan WJ, Tang WM, Huang K, Huang J, Yao J, Dong ZY. Cao R, et al. Among authors: wang t. Theranostics. 2020 Sep 2;10(24):11080-11091. doi: 10.7150/thno.49864. eCollection 2020. Theranostics. 2020. PMID: 33042271 Free PMC article.

9

Crowdsourcing digital health measures to predict Parkinson's disease severity: the Parkinson's Disease Digital Biomarker DREAM Challenge.

Sieberts SK, Schaff J, Duda M, Pataki BÁ, Sun M, Snyder P, Daneault JF, Parisi F, Costante G, Rubin U, Banda P, Chae Y, Chaibub Neto E, Dorsey ER, Aydın Z, Chen A, Elo LL, Espino C, Glaab E, Goan E, Golabchi FN, Görmez Y, Jaakkola MK, Jonnagaddala J, Klén R, Li D, McDaniel C, Perrin D, Perumal TM, Rad NM, Rainaldi E, Sapienza S, Schwab P, Shokhirev N, Venäläinen MS, Vergara-Diaz G, Zhang Y; Parkinson’s Disease Digital Biomarker Challenge Consortium; Wang Y, Guan Y, Brunner D, Bonato P, Mangravite LM, Omberg L. Sieberts SK, et al. NPJ Digit Med. 2021 Mar 19;4(1):53. doi: 10.1038/s41746-021-00414-7. NPJ Digit Med. 2021. PMID: 33742069 Free PMC article.

10

MOGONET integrates multi-omics data using graph convolutional networks allowing patient classification and biomarker identification.

Wang T, Shao W, Huang Z, Tang H, Zhang J, Ding Z, Huang K. Wang T, et al. Nat Commun. 2021 Jun 8;12(1):3445. doi: 10.1038/s41467-021-23774-w. Nat Commun. 2021. PMID: 34103512 Free PMC article.

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