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Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle.
Murat C, Payen T, Noel B, Kuo A, Morin E, Chen J, Kohler A, Krizsán K, Balestrini R, Da Silva C, Montanini B, Hainaut M, Levati E, Barry KW, Belfiori B, Cichocki N, Clum A, Dockter RB, Fauchery L, Guy J, Iotti M, Le Tacon F, Lindquist EA, Lipzen A, Malagnac F, Mello A, Molinier V, Miyauchi S, Poulain J, Riccioni C, Rubini A, Sitrit Y, Splivallo R, Traeger S, Wang M, Žifčáková L, Wipf D, Zambonelli A, Paolocci F, Nowrousian M, Ottonello S, Baldrian P, Spatafora JW, Henrissat B, Nagy LG, Aury JM, Wincker P, Grigoriev IV, Bonfante P, Martin FM. Murat C, et al. Among authors: wang m. Nat Ecol Evol. 2018 Dec;2(12):1956-1965. doi: 10.1038/s41559-018-0710-4. Epub 2018 Nov 12. Nat Ecol Evol. 2018. PMID: 30420746 Free article.
Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists.
Martino E, Morin E, Grelet GA, Kuo A, Kohler A, Daghino S, Barry KW, Cichocki N, Clum A, Dockter RB, Hainaut M, Kuo RC, LaButti K, Lindahl BD, Lindquist EA, Lipzen A, Khouja HR, Magnuson J, Murat C, Ohm RA, Singer SW, Spatafora JW, Wang M, Veneault-Fourrey C, Henrissat B, Grigoriev IV, Martin FM, Perotto S. Martino E, et al. Among authors: wang m. New Phytol. 2018 Feb;217(3):1213-1229. doi: 10.1111/nph.14974. Epub 2018 Jan 7. New Phytol. 2018. PMID: 29315638 Free article.
Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts.
Druzhinina IS, Chenthamara K, Zhang J, Atanasova L, Yang D, Miao Y, Rahimi MJ, Grujic M, Cai F, Pourmehdi S, Salim KA, Pretzer C, Kopchinskiy AG, Henrissat B, Kuo A, Hundley H, Wang M, Aerts A, Salamov A, Lipzen A, LaButti K, Barry K, Grigoriev IV, Shen Q, Kubicek CP. Druzhinina IS, et al. Among authors: wang m. PLoS Genet. 2018 Apr 9;14(4):e1007322. doi: 10.1371/journal.pgen.1007322. eCollection 2018 Apr. PLoS Genet. 2018. PMID: 29630596 Free PMC article.
Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle.
Murat C, Kuo A, Barry KW, Clum A, Dockter RB, Fauchery L, Iotti M, Kohler A, LaButti K, Lindquist EA, Lipzen A, Morin E, Wang M, Grigoriev IV, Zambonelli A, Martin FM. Murat C, et al. Among authors: wang m. Genome Announc. 2018 Jun 21;6(25):e00537-18. doi: 10.1128/genomeA.00537-18. Genome Announc. 2018. PMID: 29930051 Free PMC article.
Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass.
Miyauchi S, Rancon A, Drula E, Hage H, Chaduli D, Favel A, Grisel S, Henrissat B, Herpoël-Gimbert I, Ruiz-Dueñas FJ, Chevret D, Hainaut M, Lin J, Wang M, Pangilinan J, Lipzen A, Lesage-Meessen L, Navarro D, Riley R, Grigoriev IV, Zhou S, Raouche S, Rosso MN. Miyauchi S, et al. Among authors: wang m. Biotechnol Biofuels. 2018 Jul 23;11:201. doi: 10.1186/s13068-018-1198-5. eCollection 2018. Biotechnol Biofuels. 2018. PMID: 30061923 Free PMC article.
Dichomitus squalens partially tailors its molecular responses to the composition of solid wood.
Daly P, López SC, Peng M, Lancefield CS, Purvine SO, Kim YM, Zink EM, Dohnalkova A, Singan VR, Lipzen A, Dilworth D, Wang M, Ng V, Robinson E, Orr G, Baker SE, Bruijnincx PCA, Hildén KS, Grigoriev IV, Mäkelä MR, de Vries RP. Daly P, et al. Among authors: wang m. Environ Microbiol. 2018 Nov;20(11):4141-4156. doi: 10.1111/1462-2920.14416. Epub 2018 Oct 18. Environ Microbiol. 2018. PMID: 30246402
Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass.
Benocci T, Aguilar-Pontes MV, Kun RS, Lubbers RJM, Lail K, Wang M, Lipzen A, Ng V, Grigoriev IV, Seiboth B, Daly P, de Vries RP. Benocci T, et al. Among authors: wang m. Biotechnol Biofuels. 2019 Apr 9;12:81. doi: 10.1186/s13068-019-1422-y. eCollection 2019. Biotechnol Biofuels. 2019. PMID: 31007715 Free PMC article.
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