Waldmann J - Search Results

1

Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom.

Teeling H, Fuchs BM, Becher D, Klockow C, Gardebrecht A, Bennke CM, Kassabgy M, Huang S, Mann AJ, Waldmann J, Weber M, Klindworth A, Otto A, Lange J, Bernhardt J, Reinsch C, Hecker M, Peplies J, Bockelmann FD, Callies U, Gerdts G, Wichels A, Wiltshire KH, Glöckner FO, Schweder T, Amann R. Teeling H, et al. Among authors: waldmann j. Science. 2012 May 4;336(6081):608-11. doi: 10.1126/science.1218344. Science. 2012. PMID: 22556258

2

Diversity and activity of marine bacterioplankton during a diatom bloom in the North Sea assessed by total RNA and pyrotag sequencing.

Klindworth A, Mann AJ, Huang S, Wichels A, Quast C, Waldmann J, Teeling H, Glöckner FO. Klindworth A, et al. Among authors: waldmann j. Mar Genomics. 2014 Dec;18 Pt B:185-92. doi: 10.1016/j.margen.2014.08.007. Epub 2014 Sep 6. Mar Genomics. 2014. PMID: 25211053 Free article.

3

Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms.

Teeling H, Fuchs BM, Bennke CM, Krüger K, Chafee M, Kappelmann L, Reintjes G, Waldmann J, Quast C, Glöckner FO, Lucas J, Wichels A, Gerdts G, Wiltshire KH, Amann RI. Teeling H, et al. Among authors: waldmann j. Elife. 2016 Apr 7;5:e11888. doi: 10.7554/eLife.11888. Elife. 2016. PMID: 27054497 Free PMC article.

4

Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics.

Weber M, Teeling H, Huang S, Waldmann J, Kassabgy M, Fuchs BM, Klindworth A, Klockow C, Wichels A, Gerdts G, Amann R, Glöckner FO. Weber M, et al. Among authors: waldmann j. ISME J. 2011 May;5(5):918-28. doi: 10.1038/ismej.2010.180. Epub 2010 Dec 16. ISME J. 2011. PMID: 21160538 Free PMC article.

5

Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean.

Gómez-Pereira PR, Schüler M, Fuchs BM, Bennke C, Teeling H, Waldmann J, Richter M, Barbe V, Bataille E, Glöckner FO, Amann R. Gómez-Pereira PR, et al. Among authors: waldmann j. Environ Microbiol. 2012 Jan;14(1):52-66. doi: 10.1111/j.1462-2920.2011.02555.x. Epub 2011 Sep 6. Environ Microbiol. 2012. PMID: 21895912

6

Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1.

Duhaime MB, Wichels A, Waldmann J, Teeling H, Glöckner FO. Duhaime MB, et al. Among authors: waldmann j. ISME J. 2011 Jan;5(1):107-21. doi: 10.1038/ismej.2010.94. Epub 2010 Jul 8. ISME J. 2011. PMID: 20613791 Free PMC article.

7

TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences.

Teeling H, Waldmann J, Lombardot T, Bauer M, Glöckner FO. Teeling H, et al. Among authors: waldmann j. BMC Bioinformatics. 2004 Oct 26;5:163. doi: 10.1186/1471-2105-5-163. BMC Bioinformatics. 2004. PMID: 15507136 Free PMC article.

8

Quantifying the effect of environment stability on the transcription factor repertoire of marine microbes.

Kostadinov I, Kottmann R, Ramette A, Waldmann J, Buttigieg PL, Glöckner FO. Kostadinov I, et al. Among authors: waldmann j. Microb Inform Exp. 2011 Sep 7;1(1):9. doi: 10.1186/2042-5783-1-9. Microb Inform Exp. 2011. PMID: 22587903 Free PMC article.

9

FastaValidator: an open-source Java library to parse and validate FASTA formatted sequences.

Waldmann J, Gerken J, Hankeln W, Schweer T, Glöckner FO. Waldmann J, et al. BMC Res Notes. 2014 Jun 14;7:365. doi: 10.1186/1756-0500-7-365. BMC Res Notes. 2014. PMID: 24929426 Free PMC article.

10

Megx.net: integrated database resource for marine ecological genomics.

Kottmann R, Kostadinov I, Duhaime MB, Buttigieg PL, Yilmaz P, Hankeln W, Waldmann J, Glöckner FO. Kottmann R, et al. Among authors: waldmann j. Nucleic Acids Res. 2010 Jan;38(Database issue):D391-5. doi: 10.1093/nar/gkp918. Epub 2009 Oct 25. Nucleic Acids Res. 2010. PMID: 19858098 Free PMC article.

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