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A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis.
Zhang R, Kuo R, Coulter M, Calixto CPG, Entizne JC, Guo W, Marquez Y, Milne L, Riegler S, Matsui A, Tanaka M, Harvey S, Gao Y, Wießner-Kroh T, Paniagua A, Crespi M, Denby K, Hur AB, Huq E, Jantsch M, Jarmolowski A, Koester T, Laubinger S, Li QQ, Gu L, Seki M, Staiger D, Sunkar R, Szweykowska-Kulinska Z, Tu SL, Wachter A, Waugh R, Xiong L, Zhang XN, Conesa A, Reddy ASN, Barta A, Kalyna M, Brown JWS. Zhang R, et al. Among authors: wachter a. Genome Biol. 2022 Jul 7;23(1):149. doi: 10.1186/s13059-022-02711-0. Genome Biol. 2022. PMID: 35799267 Free PMC article.
Alternative Splicing Substantially Diversifies the Transcriptome during Early Photomorphogenesis and Correlates with the Energy Availability in Arabidopsis.
Hartmann L, Drewe-Boß P, Wießner T, Wagner G, Geue S, Lee HC, Obermüller DM, Kahles A, Behr J, Sinz FH, Rätsch G, Wachter A. Hartmann L, et al. Among authors: wachter a. Plant Cell. 2016 Nov;28(11):2715-2734. doi: 10.1105/tpc.16.00508. Epub 2016 Nov 1. Plant Cell. 2016. PMID: 27803310 Free PMC article.
Expression profiling of metabolic genes in response to methyl jasmonate reveals regulation of genes of primary and secondary sulfur-related pathways in Arabidopsis thaliana.
Jost R, Altschmied L, Bloem E, Bogs J, Gershenzon J, Hähnel U, Hänsch R, Hartmann T, Kopriva S, Kruse C, Mendel RR, Papenbrock J, Reichelt M, Rennenberg H, Schnug E, Schmidt A, Textor S, Tokuhisa J, Wachter A, Wirtz M, Rausch T, Hell R. Jost R, et al. Among authors: wachter a. Photosynth Res. 2005 Dec;86(3):491-508. doi: 10.1007/s11120-005-7386-8. Epub 2005 Nov 15. Photosynth Res. 2005. PMID: 16307302
Accurate detection of differential RNA processing.
Drewe P, Stegle O, Hartmann L, Kahles A, Bohnert R, Wachter A, Borgwardt K, Rätsch G. Drewe P, et al. Among authors: wachter a. Nucleic Acids Res. 2013 May 1;41(10):5189-98. doi: 10.1093/nar/gkt211. Epub 2013 Apr 12. Nucleic Acids Res. 2013. PMID: 23585274 Free PMC article.
116 results