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Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.
Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang Q, Li L, Bayer M, Bolser D, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Sampath D, Heavens D, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke JK, Tan C, Wang S, Yin S, Zhou G, Poland JA, Bellgard MI, Houben A, Doležel J, Ayling S, Lonardi S, Langridge P, Muehlbauer GJ, Kersey P, Clark MD, Caccamo M, Schulman AH, Platzer M, Close TJ, Hansson M, Zhang G, Braumann I, Li C, Waugh R, Scholz U, Stein N, Mascher M. Beier S, et al. Among authors: vrana j. Sci Data. 2017 Apr 27;4:170044. doi: 10.1038/sdata.2017.44. Sci Data. 2017. PMID: 28448065 Free PMC article.
A chromosome conformation capture ordered sequence of the barley genome.
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang XQ, Zhang Q, Barrero RA, Li L, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Bolser D, Colmsee C, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Chailyan A, Sampath D, Heavens D, Clissold L, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke JK, Tan C, Wang P, Wang S, Yin S, Zhou G, Poland JA, Bellgard MI, Borisjuk L, Houben A, Doležel J, Ayling S, Lonardi S, Kersey P, Langridge P, Muehlbauer GJ, Clark MD, Caccamo M, Schulman AH, Mayer KFX, Platzer M, Close TJ, Scholz U, Hansson M, Zhang G, Braumann I, Spannagl M, Li C, Waugh R, Stein N. Mascher M, et al. Among authors: vrana j. Nature. 2017 Apr 26;544(7651):427-433. doi: 10.1038/nature22043. Nature. 2017. PMID: 28447635 Free article.
Chromosomes in the flow to simplify genome analysis.
Doležel J, Vrána J, Safář J, Bartoš J, Kubaláková M, Simková H. Doležel J, et al. Among authors: vrana j. Funct Integr Genomics. 2012 Aug;12(3):397-416. doi: 10.1007/s10142-012-0293-0. Epub 2012 Aug 16. Funct Integr Genomics. 2012. PMID: 22895700 Free PMC article. Review.
BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes.
Staňková H, Hastie AR, Chan S, Vrána J, Tulpová Z, Kubaláková M, Visendi P, Hayashi S, Luo M, Batley J, Edwards D, Doležel J, Šimková H. Staňková H, et al. Among authors: vrana j. Plant Biotechnol J. 2016 Jul;14(7):1523-31. doi: 10.1111/pbi.12513. Epub 2016 Jan 23. Plant Biotechnol J. 2016. PMID: 26801360 Free PMC article.
The genome of cowpea (Vigna unguiculata [L.] Walp.).
Lonardi S, Muñoz-Amatriaín M, Liang Q, Shu S, Wanamaker SI, Lo S, Tanskanen J, Schulman AH, Zhu T, Luo MC, Alhakami H, Ounit R, Hasan AM, Verdier J, Roberts PA, Santos JRP, Ndeve A, Doležel J, Vrána J, Hokin SA, Farmer AD, Cannon SB, Close TJ. Lonardi S, et al. Among authors: vrana j. Plant J. 2019 Jun;98(5):767-782. doi: 10.1111/tpj.14349. Plant J. 2019. PMID: 31017340 Free PMC article.
Reticulate evolution of the rye genome.
Martis MM, Zhou R, Haseneyer G, Schmutzer T, Vrána J, Kubaláková M, König S, Kugler KG, Scholz U, Hackauf B, Korzun V, Schön CC, Dolezel J, Bauer E, Mayer KF, Stein N. Martis MM, et al. Among authors: vrana j. Plant Cell. 2013 Oct;25(10):3685-98. doi: 10.1105/tpc.113.114553. Epub 2013 Oct 8. Plant Cell. 2013. PMID: 24104565 Free PMC article.
Advances in plant chromosome genomics.
Doležel J, Vrána J, Cápal P, Kubaláková M, Burešová V, Simková H. Doležel J, et al. Among authors: vrana j. Biotechnol Adv. 2014 Jan-Feb;32(1):122-36. doi: 10.1016/j.biotechadv.2013.12.011. Epub 2014 Jan 7. Biotechnol Adv. 2014. PMID: 24406816 Free article. Review.
321 results