Vlassis N - Search Results

1

VizBin - an application for reference-independent visualization and human-augmented binning of metagenomic data.

Laczny CC, Sternal T, Plugaru V, Gawron P, Atashpendar A, Margossian HH, Coronado S, der Maaten Lv, Vlassis N, Wilmes P. Laczny CC, et al. Among authors: vlassis n. Microbiome. 2015 Jan 20;3(1):1. doi: 10.1186/s40168-014-0066-1. eCollection 2015. Microbiome. 2015. PMID: 25621171 Free PMC article.

2

Alignment-free visualization of metagenomic data by nonlinear dimension reduction.

Laczny CC, Pinel N, Vlassis N, Wilmes P. Laczny CC, et al. Among authors: vlassis n. Sci Rep. 2014 Mar 31;4:4516. doi: 10.1038/srep04516. Sci Rep. 2014. PMID: 24682077 Free PMC article.

3

Condensing the omics fog of microbial communities.

Muller EE, Glaab E, May P, Vlassis N, Wilmes P. Muller EE, et al. Among authors: vlassis n. Trends Microbiol. 2013 Jul;21(7):325-33. doi: 10.1016/j.tim.2013.04.009. Epub 2013 Jun 10. Trends Microbiol. 2013. PMID: 23764387

4

Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage.

Muller EE, Pinel N, Laczny CC, Hoopmann MR, Narayanasamy S, Lebrun LA, Roume H, Lin J, May P, Hicks ND, Heintz-Buschart A, Wampach L, Liu CM, Price LB, Gillece JD, Guignard C, Schupp JM, Vlassis N, Baliga NS, Moritz RL, Keim PS, Wilmes P. Muller EE, et al. Among authors: vlassis n. Nat Commun. 2014 Nov 26;5:5603. doi: 10.1038/ncomms6603. Nat Commun. 2014. PMID: 25424998 Free PMC article.

5

The Role of Metabolomics in the Study of Cancer Biomarkers and in the Development of Diagnostic Tools.

Trezzi JP, Vlassis N, Hiller K. Trezzi JP, et al. Among authors: vlassis n. Adv Exp Med Biol. 2015;867:41-57. doi: 10.1007/978-94-017-7215-0_4. Adv Exp Med Biol. 2015. PMID: 26530359 Review.

6

fastGapFill: efficient gap filling in metabolic networks.

Thiele I, Vlassis N, Fleming RM. Thiele I, et al. Among authors: vlassis n. Bioinformatics. 2014 Sep 1;30(17):2529-31. doi: 10.1093/bioinformatics/btu321. Epub 2014 May 7. Bioinformatics. 2014. PMID: 24812336 Free PMC article.

7

FastMotif: spectral sequence motif discovery.

Colombo N, Vlassis N. Colombo N, et al. Among authors: vlassis n. Bioinformatics. 2015 Aug 15;31(16):2623-31. doi: 10.1093/bioinformatics/btv208. Epub 2015 Apr 16. Bioinformatics. 2015. PMID: 25886979

8

GenePEN: analysis of network activity alterations in complex diseases via the pairwise elastic net.

Vlassis N, Glaab E. Vlassis N, et al. Stat Appl Genet Mol Biol. 2015 Apr;14(2):221-4. doi: 10.1515/sagmb-2014-0045. Stat Appl Genet Mol Biol. 2015. PMID: 25720129 Free article.

9

Fast reconstruction of compact context-specific metabolic network models.

Vlassis N, Pacheco MP, Sauter T. Vlassis N, et al. PLoS Comput Biol. 2014 Jan;10(1):e1003424. doi: 10.1371/journal.pcbi.1003424. Epub 2014 Jan 16. PLoS Comput Biol. 2014. PMID: 24453953 Free PMC article.

10

From systems biology to systems biomedicine.

Antony PM, Balling R, Vlassis N. Antony PM, et al. Among authors: vlassis n. Curr Opin Biotechnol. 2012 Aug;23(4):604-8. doi: 10.1016/j.copbio.2011.11.009. Epub 2011 Nov 24. Curr Opin Biotechnol. 2012. PMID: 22119097

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