Viruel J - Search Results

1

Taxon-specific or universal? Using target capture to study the evolutionary history of rapid radiations.

Yardeni G, Viruel J, Paris M, Hess J, Groot Crego C, de La Harpe M, Rivera N, Barfuss MHJ, Till W, Guzmán-Jacob V, Krömer T, Lexer C, Paun O, Leroy T. Yardeni G, et al. Among authors: viruel j. Mol Ecol Resour. 2022 Apr;22(3):927-945. doi: 10.1111/1755-0998.13523. Epub 2021 Oct 10. Mol Ecol Resour. 2022. PMID: 34606683 Free PMC article.

2

Genome-wide footprints in the carob tree (Ceratonia siliqua) unveil a new domestication pattern of a fruit tree in the Mediterranean.

Baumel A, Nieto Feliner G, Médail F, La Malfa S, Di Guardo M, Bou Dagher Kharrat M, Lakhal-Mirleau F, Frelon V, Ouahmane L, Diadema K, Sanguin H, Viruel J. Baumel A, et al. Among authors: viruel j. Mol Ecol. 2022 Aug;31(15):4095-4111. doi: 10.1111/mec.16563. Epub 2022 Jun 30. Mol Ecol. 2022. PMID: 35691023 Free PMC article.

3

A Target Capture-Based Method to Estimate Ploidy From Herbarium Specimens.

Viruel J, Conejero M, Hidalgo O, Pokorny L, Powell RF, Forest F, Kantar MB, Soto Gomez M, Graham SW, Gravendeel B, Wilkin P, Leitch IJ. Viruel J, et al. Front Plant Sci. 2019 Jul 24;10:937. doi: 10.3389/fpls.2019.00937. eCollection 2019. Front Plant Sci. 2019. PMID: 31396248 Free PMC article.

4

Biogeography and genome size evolution of the oldest extant vascular plant genus, Equisetum (Equisetaceae).

Christenhusz MJM, Chase MW, Fay MF, Hidalgo O, Leitch IJ, Pellicer J, Viruel J. Christenhusz MJM, et al. Among authors: viruel j. Ann Bot. 2021 Apr 17;127(5):681-695. doi: 10.1093/aob/mcab005. Ann Bot. 2021. PMID: 33598697 Free PMC article.

5

A Bioinformatic Pipeline to Estimate Ploidy Level from Target Capture Sequence Data Obtained from Herbarium Specimens.

Viruel J, Hidalgo O, Pokorny L, Forest F, Gravendeel B, Wilkin P, Leitch IJ. Viruel J, et al. Methods Mol Biol. 2023;2672:115-126. doi: 10.1007/978-1-0716-3226-0_5. Methods Mol Biol. 2023. PMID: 37335471

6

Strategies for reducing per-sample costs in target capture sequencing for phylogenomics and population genomics in plants.

Hale H, Gardner EM, Viruel J, Pokorny L, Johnson MG. Hale H, et al. Among authors: viruel j. Appl Plant Sci. 2020 Apr 14;8(4):e11337. doi: 10.1002/aps3.11337. eCollection 2020 Apr. Appl Plant Sci. 2020. PMID: 32351798 Free PMC article. Review.

7

Patterns of transmission and horizontal gene transfer in the Dioscorea sansibarensis leaf symbiosis revealed by whole-genome sequencing.

Danneels B, Viruel J, Mcgrath K, Janssens SB, Wales N, Wilkin P, Carlier A. Danneels B, et al. Among authors: viruel j. Curr Biol. 2021 Jun 21;31(12):2666-2673.e4. doi: 10.1016/j.cub.2021.03.049. Epub 2021 Apr 13. Curr Biol. 2021. PMID: 33852872 Free article.

8

A customized nuclear target enrichment approach for developing a phylogenomic baseline for Dioscorea yams (Dioscoreaceae).

Soto Gomez M, Pokorny L, Kantar MB, Forest F, Leitch IJ, Gravendeel B, Wilkin P, Graham SW, Viruel J. Soto Gomez M, et al. Among authors: viruel j. Appl Plant Sci. 2019 Jun 13;7(6):e11254. doi: 10.1002/aps3.11254. eCollection 2019 Jun. Appl Plant Sci. 2019. PMID: 31236313 Free PMC article.

9

Characterization of sequence variability hotspots in Cranichideae plastomes (Orchidaceae, Orchidoideae).

Smidt EC, Páez MZ, Vieira LDN, Viruel J, de Baura VA, Balsanelli E, de Souza EM, Chase MW. Smidt EC, et al. Among authors: viruel j. PLoS One. 2020 Jan 28;15(1):e0227991. doi: 10.1371/journal.pone.0227991. eCollection 2020. PLoS One. 2020. PMID: 31990943 Free PMC article.

10

A customised target capture sequencing tool for molecular identification of Aloe vera and relatives.

Woudstra Y, Viruel J, Fritzsche M, Bleazard T, Mate R, Howard C, Rønsted N, Grace OM. Woudstra Y, et al. Among authors: viruel j. Sci Rep. 2021 Dec 21;11(1):24347. doi: 10.1038/s41598-021-03300-0. Sci Rep. 2021. PMID: 34934068 Free PMC article.

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