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A robust multiplex immunofluorescence and digital pathology workflow for the characterisation of the tumour immune microenvironment.
Viratham Pulsawatdi A, Craig SG, Bingham V, McCombe K, Humphries MP, Senevirathne S, Richman SD, Quirke P, Campo L, Domingo E, Maughan TS, James JA, Salto-Tellez M. Viratham Pulsawatdi A, et al. Mol Oncol. 2020 Oct;14(10):2384-2402. doi: 10.1002/1878-0261.12764. Epub 2020 Sep 1. Mol Oncol. 2020. PMID: 32671911 Free PMC article.
Orthogonal MET analysis in a population-representative stage II-III colon cancer cohort: prognostic and potential therapeutic implications.
Craig SG, Mende S, Humphries MP, Bingham V, Viratham Pulsawatdi A, Loughrey MB, Coleman HG, McQuaid S, Wilson RH, Van Schaeybroeck S, James JA, Salto-Tellez M. Craig SG, et al. Among authors: viratham pulsawatdi a. Mol Oncol. 2021 Dec;15(12):3317-3328. doi: 10.1002/1878-0261.13089. Epub 2021 Nov 1. Mol Oncol. 2021. PMID: 34428346 Free PMC article.
Immune status is prognostic for poor survival in colorectal cancer patients and is associated with tumour hypoxia.
Craig SG, Humphries MP, Alderdice M, Bingham V, Richman SD, Loughrey MB, Coleman HG, Viratham-Pulsawatdi A, McCombe K, Murray GI, Blake A, Domingo E, Robineau J, Brown L, Fisher D, Seymour MT, Quirke P, Bankhead P, McQuaid S, Lawler M, McArt DG, Maughan TS, James JA, Salto-Tellez M. Craig SG, et al. Among authors: viratham pulsawatdi a. Br J Cancer. 2020 Oct;123(8):1280-1288. doi: 10.1038/s41416-020-0985-5. Epub 2020 Jul 20. Br J Cancer. 2020. PMID: 32684627 Free PMC article.
HistoClean: Open-source software for histological image pre-processing and augmentation to improve development of robust convolutional neural networks.
McCombe KD, Craig SG, Viratham Pulsawatdi A, Quezada-Marín JI, Hagan M, Rajendran S, Humphries MP, Bingham V, Salto-Tellez M, Gault R, James JA. McCombe KD, et al. Among authors: viratham pulsawatdi a. Comput Struct Biotechnol J. 2021 Aug 26;19:4840-4853. doi: 10.1016/j.csbj.2021.08.033. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34522291 Free PMC article.