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Analysing the fitness cost of antibiotic resistance to identify targets for combination antimicrobials.
Rasouly A, Shamovsky Y, Epshtein V, Tam K, Vasilyev N, Hao Z, Quarta G, Pani B, Li L, Vallin C, Shamovsky I, Krishnamurthy S, Shtilerman A, Vantine S, Torres VJ, Nudler E. Rasouly A, et al. Among authors: vasilyev n. Nat Microbiol. 2021 Nov;6(11):1410-1423. doi: 10.1038/s41564-021-00973-1. Epub 2021 Oct 25. Nat Microbiol. 2021. PMID: 34697460 Free PMC article.
Structure of RNA polymerase bound to ribosomal 30S subunit.
Demo G, Rasouly A, Vasilyev N, Svetlov V, Loveland AB, Diaz-Avalos R, Grigorieff N, Nudler E, Korostelev AA. Demo G, et al. Among authors: vasilyev n. Elife. 2017 Oct 13;6:e28560. doi: 10.7554/eLife.28560. Elife. 2017. PMID: 29027901 Free PMC article.
Structural Basis of Dot1L Stimulation by Histone H2B Lysine 120 Ubiquitination.
Valencia-Sánchez MI, De Ioannes P, Wang M, Vasilyev N, Chen R, Nudler E, Armache JP, Armache KJ. Valencia-Sánchez MI, et al. Among authors: vasilyev n. Mol Cell. 2019 Jun 6;74(5):1010-1019.e6. doi: 10.1016/j.molcel.2019.03.029. Epub 2019 Apr 10. Mol Cell. 2019. PMID: 30981630 Free PMC article.
The structure of a virus-encoded nucleosome.
Valencia-Sánchez MI, Abini-Agbomson S, Wang M, Lee R, Vasilyev N, Zhang J, De Ioannes P, La Scola B, Talbert P, Henikoff S, Nudler E, Erives A, Armache KJ. Valencia-Sánchez MI, et al. Among authors: vasilyev n. Nat Struct Mol Biol. 2021 May;28(5):413-417. doi: 10.1038/s41594-021-00585-7. Epub 2021 Apr 29. Nat Struct Mol Biol. 2021. PMID: 33927388 Free PMC article.
Inhibitors of bacterial H2S biogenesis targeting antibiotic resistance and tolerance.
Shatalin K, Nuthanakanti A, Kaushik A, Shishov D, Peselis A, Shamovsky I, Pani B, Lechpammer M, Vasilyev N, Shatalina E, Rebatchouk D, Mironov A, Fedichev P, Serganov A, Nudler E. Shatalin K, et al. Among authors: vasilyev n. Science. 2021 Jun 11;372(6547):1169-1175. doi: 10.1126/science.abd8377. Science. 2021. PMID: 34112687 Free PMC article.
Unbiased proteomic mapping of the LINE-1 promoter using CRISPR Cas9.
Briggs EM, Mita P, Sun X, Ha S, Vasilyev N, Leopold ZR, Nudler E, Boeke JD, Logan SK. Briggs EM, et al. Among authors: vasilyev n. Mob DNA. 2021 Aug 23;12(1):21. doi: 10.1186/s13100-021-00249-9. Mob DNA. 2021. PMID: 34425899 Free PMC article.
Crucial role and mechanism of transcription-coupled DNA repair in bacteria.
Bharati BK, Gowder M, Zheng F, Alzoubi K, Svetlov V, Kamarthapu V, Weaver JW, Epshtein V, Vasilyev N, Shen L, Zhang Y, Nudler E. Bharati BK, et al. Among authors: vasilyev n. Nature. 2022 Apr;604(7904):152-159. doi: 10.1038/s41586-022-04530-6. Epub 2022 Mar 30. Nature. 2022. PMID: 35355008 Free PMC article.
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