Vasilyev N - Search Results

1

Inhibitors of bacterial H₂S biogenesis targeting antibiotic resistance and tolerance.

Shatalin K, Nuthanakanti A, Kaushik A, Shishov D, Peselis A, Shamovsky I, Pani B, Lechpammer M, Vasilyev N, Shatalina E, Rebatchouk D, Mironov A, Fedichev P, Serganov A, Nudler E. Shatalin K, et al. Among authors: vasilyev n. Science. 2021 Jun 11;372(6547):1169-1175. doi: 10.1126/science.abd8377. Science. 2021. PMID: 34112687 Free PMC article.

2

Structures of RNA complexes with the Escherichia coli RNA pyrophosphohydrolase RppH unveil the basis for specific 5'-end-dependent mRNA decay.

Vasilyev N, Serganov A. Vasilyev N, et al. J Biol Chem. 2015 Apr 10;290(15):9487-99. doi: 10.1074/jbc.M114.634824. Epub 2015 Feb 5. J Biol Chem. 2015. PMID: 25657011 Free PMC article.

3

Preparation of Short 5'-Triphosphorylated Oligoribonucleotides for Crystallographic and Biochemical Studies.

Vasilyev N, Serganov A. Vasilyev N, et al. Methods Mol Biol. 2016;1320:11-20. doi: 10.1007/978-1-4939-2763-0_2. Methods Mol Biol. 2016. PMID: 26227034

4

Crystal structure reveals specific recognition of a G-quadruplex RNA by a β-turn in the RGG motif of FMRP.

Vasilyev N, Polonskaia A, Darnell JC, Darnell RB, Patel DJ, Serganov A. Vasilyev N, et al. Proc Natl Acad Sci U S A. 2015 Sep 29;112(39):E5391-400. doi: 10.1073/pnas.1515737112. Epub 2015 Sep 15. Proc Natl Acad Sci U S A. 2015. PMID: 26374839 Free PMC article.

5

A Novel RNA Phosphorylation State Enables 5' End-Dependent Degradation in Escherichia coli.

Luciano DJ, Vasilyev N, Richards J, Serganov A, Belasco JG. Luciano DJ, et al. Among authors: vasilyev n. Mol Cell. 2017 Jul 6;67(1):44-54.e6. doi: 10.1016/j.molcel.2017.05.035. Epub 2017 Jun 29. Mol Cell. 2017. PMID: 28673541 Free PMC article.

6

Structure of RNA polymerase bound to ribosomal 30S subunit.

Demo G, Rasouly A, Vasilyev N, Svetlov V, Loveland AB, Diaz-Avalos R, Grigorieff N, Nudler E, Korostelev AA. Demo G, et al. Among authors: vasilyev n. Elife. 2017 Oct 13;6:e28560. doi: 10.7554/eLife.28560. Elife. 2017. PMID: 29027901 Free PMC article.

7

Importance of a diphosphorylated intermediate for RppH-dependent RNA degradation.

Luciano DJ, Vasilyev N, Richards J, Serganov A, Belasco JG. Luciano DJ, et al. Among authors: vasilyev n. RNA Biol. 2018;15(6):703-706. doi: 10.1080/15476286.2018.1460995. Epub 2018 May 29. RNA Biol. 2018. PMID: 29619898 Free PMC article.

8

Structural and kinetic insights into stimulation of RppH-dependent RNA degradation by the metabolic enzyme DapF.

Gao A, Vasilyev N, Luciano DJ, Levenson-Palmer R, Richards J, Marsiglia WM, Traaseth NJ, Belasco JG, Serganov A. Gao A, et al. Among authors: vasilyev n. Nucleic Acids Res. 2018 Jul 27;46(13):6841-6856. doi: 10.1093/nar/gky327. Nucleic Acids Res. 2018. PMID: 29733359 Free PMC article.

9

Noncanonical features and modifications on the 5'-end of bacterial sRNAs and mRNAs.

Vasilyev N, Gao A, Serganov A. Vasilyev N, et al. Wiley Interdiscip Rev RNA. 2019 Mar;10(2):e1509. doi: 10.1002/wrna.1509. Epub 2018 Oct 1. Wiley Interdiscip Rev RNA. 2019. PMID: 30276982 Free PMC article. Review.

10

Structural Basis of Dot1L Stimulation by Histone H2B Lysine 120 Ubiquitination.

Valencia-Sánchez MI, De Ioannes P, Wang M, Vasilyev N, Chen R, Nudler E, Armache JP, Armache KJ. Valencia-Sánchez MI, et al. Among authors: vasilyev n. Mol Cell. 2019 Jun 6;74(5):1010-1019.e6. doi: 10.1016/j.molcel.2019.03.029. Epub 2019 Apr 10. Mol Cell. 2019. PMID: 30981630 Free PMC article.

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