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Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects.
Kole C, Muthamilarasan M, Henry R, Edwards D, Sharma R, Abberton M, Batley J, Bentley A, Blakeney M, Bryant J, Cai H, Cakir M, Cseke LJ, Cockram J, de Oliveira AC, De Pace C, Dempewolf H, Ellison S, Gepts P, Greenland A, Hall A, Hori K, Hughes S, Humphreys MW, Iorizzo M, Ismail AM, Marshall A, Mayes S, Nguyen HT, Ogbonnaya FC, Ortiz R, Paterson AH, Simon PW, Tohme J, Tuberosa R, Valliyodan B, Varshney RK, Wullschleger SD, Yano M, Prasad M. Kole C, et al. Among authors: varshney rk. Front Plant Sci. 2015 Aug 11;6:563. doi: 10.3389/fpls.2015.00563. eCollection 2015. Front Plant Sci. 2015. PMID: 26322050 Free PMC article. Review.
Genomics-assisted breeding for crop improvement.
Varshney RK, Graner A, Sorrells ME. Varshney RK, et al. Trends Plant Sci. 2005 Dec;10(12):621-30. doi: 10.1016/j.tplants.2005.10.004. Epub 2005 Nov 14. Trends Plant Sci. 2005. PMID: 16290213 Review.
Orphan legume crops enter the genomics era!
Varshney RK, Close TJ, Singh NK, Hoisington DA, Cook DR. Varshney RK, et al. Curr Opin Plant Biol. 2009 Apr;12(2):202-10. doi: 10.1016/j.pbi.2008.12.004. Epub 2009 Jan 20. Curr Opin Plant Biol. 2009. PMID: 19157958 Free article. Review.
Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome.
Azam S, Thakur V, Ruperao P, Shah T, Balaji J, Amindala B, Farmer AD, Studholme DJ, May GD, Edwards D, Jones JD, Varshney RK. Azam S, et al. Among authors: varshney rk. Am J Bot. 2012 Feb;99(2):186-92. doi: 10.3732/ajb.1100419. Epub 2012 Feb 1. Am J Bot. 2012. PMID: 22301893 Free article.
Can genomics boost productivity of orphan crops?
Varshney RK, Ribaut JM, Buckler ES, Tuberosa R, Rafalski JA, Langridge P. Varshney RK, et al. Nat Biotechnol. 2012 Dec;30(12):1172-6. doi: 10.1038/nbt.2440. Nat Biotechnol. 2012. PMID: 23222781 No abstract available.
Groundnut improvement: use of genetic and genomic tools.
Janila P, Nigam SN, Pandey MK, Nagesh P, Varshney RK. Janila P, et al. Among authors: varshney rk. Front Plant Sci. 2013 Feb 25;4:23. doi: 10.3389/fpls.2013.00023. eCollection 2013. Front Plant Sci. 2013. PMID: 23443056 Free PMC article.
A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies.
Ruperao P, Chan CK, Azam S, Karafiátová M, Hayashi S, Cížková J, Saxena RK, Simková H, Song C, Vrána J, Chitikineni A, Visendi P, Gaur PM, Millán T, Singh KB, Taran B, Wang J, Batley J, Doležel J, Varshney RK, Edwards D. Ruperao P, et al. Among authors: varshney rk. Plant Biotechnol J. 2014 Aug;12(6):778-86. doi: 10.1111/pbi.12182. Epub 2014 Apr 5. Plant Biotechnol J. 2014. PMID: 24702794 Free article.
577 results