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Subpar reporting of pre-analytical variables in RNA-focused blood plasma studies.
Van Der Schueren C, Decruyenaere P, Avila Cobos F, Bult J, Deleu J, Dipalo LL, Helsmoortel HH, Hulstaert E, Morlion A, Ramos Varas E, Schoofs K, Trypsteen W, Vanden Eynde E, Van Droogenbroeck H, Verniers K, Vandesompele J, Decock A. Van Der Schueren C, et al. Among authors: vandesompele j. Mol Oncol. 2024 Apr 2. doi: 10.1002/1878-0261.13647. Online ahead of print. Mol Oncol. 2024. PMID: 38564603 Free article. Review.
Identification and validation of extracellular vesicle reference genes for the normalization of RT-qPCR data.
Pinheiro C, Guilbert N, Lippens L, Roux Q, Boiy R, Fischer S, Van Dorpe S, De Craene B, Berx G, Boterberg T, Sys G, Denys H, Miinalainen I, Mestdagh P, Vandesompele J, De Wever O, Hendrix A. Pinheiro C, et al. Among authors: vandesompele j. J Extracell Vesicles. 2024 Apr;13(4):e12421. doi: 10.1002/jev2.12421. J Extracell Vesicles. 2024. PMID: 38545822 Free PMC article.
Nationwide quality assurance of high-throughput diagnostic molecular testing during the SARS-CoV-2 pandemic: role of the Belgian National Reference Centre.
Janssen R, Cuypers L, Laenen L, Keyaerts E, Beuselinck K, Janssenswillen S, Slechten B, Bode J, Wollants E, Van Laethem K, Rector A, Bloemen M, Sijmons A, de Schaetzen N, Capron A, Van Baelen K, Pascal T, Vermeiren C, Bureau F, Vandesompele J, De Smet P, Uten W, Malonne H, Kerkhofs P, De Cock J, Matheeussen V, Verhasselt B, Gillet L, Detry G, Bearzatto B, Degosserie J, Henin C, Pairoux G; COVID-19 Genomics Belgium Consortium; Maes P, Van Ranst M, Lagrou K, Dequeker E, André E. Janssen R, et al. Among authors: vandesompele j. Virol J. 2024 Feb 10;21(1):40. doi: 10.1186/s12985-024-02308-y. Virol J. 2024. PMID: 38341597 Free PMC article. Review.
Exploring the cell-free total RNA transcriptome in diffuse large B-cell lymphoma and primary mediastinal B-cell lymphoma patients as biomarker source in blood plasma liquid biopsies.
Decruyenaere P, Giuili E, Verniers K, Anckaert J, De Grove K, Van der Linden M, Deeren D, Van Dorpe J, Offner F, Vandesompele J. Decruyenaere P, et al. Among authors: vandesompele j. Front Oncol. 2023 Oct 25;13:1221471. doi: 10.3389/fonc.2023.1221471. eCollection 2023. Front Oncol. 2023. PMID: 37954086 Free PMC article.
Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision.
Vromman M, Anckaert J, Bortoluzzi S, Buratin A, Chen CY, Chu Q, Chuang TJ, Dehghannasiri R, Dieterich C, Dong X, Flicek P, Gaffo E, Gu W, He C, Hoffmann S, Izuogu O, Jackson MS, Jakobi T, Lai EC, Nuytens J, Salzman J, Santibanez-Koref M, Stadler P, Thas O, Vanden Eynde E, Verniers K, Wen G, Westholm J, Yang L, Ye CY, Yigit N, Yuan GH, Zhang J, Zhao F, Vandesompele J, Volders PJ. Vromman M, et al. Among authors: vandesompele j. Nat Methods. 2023 Aug;20(8):1159-1169. doi: 10.1038/s41592-023-01944-6. Epub 2023 Jul 13. Nat Methods. 2023. PMID: 37443337 Free PMC article.
Digital PCR Partition Classification.
Vynck M, Chen Y, Gleerup D, Vandesompele J, Trypsteen W, Lievens A, Thas O, De Spiegelaere W. Vynck M, et al. Among authors: vandesompele j. Clin Chem. 2023 Sep 1;69(9):976-990. doi: 10.1093/clinchem/hvad063. Clin Chem. 2023. PMID: 37401391 Review.
Benchmarking blood collection tubes and processing intervals for extracellular vesicle performance metrics.
Dhondt B, Pinheiro C, Geeurickx E, Tulkens J, Vergauwen G, Van Der Pol E, Nieuwland R, Decock A, Miinalainen I, Rappu P, Schroth G, Kuersten S, Vandesompele J, Mestdagh P, Lumen N, De Wever O, Hendrix A. Dhondt B, et al. Among authors: vandesompele j. J Extracell Vesicles. 2023 May;12(5):e12315. doi: 10.1002/jev2.12315. J Extracell Vesicles. 2023. PMID: 37202906 Free PMC article.
333 results