Van Wynsberghe AW - Search Results

1

Interpreting correlated motions using normal mode analysis.

Van Wynsberghe AW, Cui Q. Van Wynsberghe AW, et al. Structure. 2006 Nov;14(11):1647-53. doi: 10.1016/j.str.2006.09.003. Structure. 2006. PMID: 17098190 Free article.

2

Comparison of mode analyses at different resolutions applied to nucleic acid systems.

Van Wynsberghe AW, Cui Q. Van Wynsberghe AW, et al. Biophys J. 2005 Nov;89(5):2939-49. doi: 10.1529/biophysj.105.065664. Epub 2005 Aug 12. Biophys J. 2005. PMID: 16100266 Free PMC article.

3

Protein structural variation in computational models and crystallographic data.

Kondrashov DA, Van Wynsberghe AW, Bannen RM, Cui Q, Phillips GN Jr. Kondrashov DA, et al. Among authors: van wynsberghe aw. Structure. 2007 Feb;15(2):169-77. doi: 10.1016/j.str.2006.12.006. Structure. 2007. PMID: 17292835 Free PMC article.

4

Normal-mode analysis suggests protein flexibility modulation throughout RNA polymerase's functional cycle.

Van Wynsberghe A, Li G, Cui Q. Van Wynsberghe A, et al. Biochemistry. 2004 Oct 19;43(41):13083-96. doi: 10.1021/bi049738+. Biochemistry. 2004. PMID: 15476402

5

Conservation and variation of structural flexibility in protein families.

Van Wynsberghe AW, Cui Q. Van Wynsberghe AW, et al. Structure. 2010 Mar 10;18(3):281-3. doi: 10.1016/j.str.2010.02.001. Structure. 2010. PMID: 20223210 Free PMC article.

6

The exclusion of glycine betaine from anionic biopolymer surface: why glycine betaine is an effective osmoprotectant but also a compatible solute.

Felitsky DJ, Cannon JG, Capp MW, Hong J, Van Wynsberghe AW, Anderson CF, Record MT Jr. Felitsky DJ, et al. Among authors: van wynsberghe aw. Biochemistry. 2004 Nov 23;43(46):14732-43. doi: 10.1021/bi049115w. Biochemistry. 2004. PMID: 15544344

7

Applying molecular dynamics simulations to identify rarely sampled ligand-bound conformational states of undecaprenyl pyrophosphate synthase, an antibacterial target.

Sinko W, de Oliveira C, Williams S, Van Wynsberghe A, Durrant JD, Cao R, Oldfield E, McCammon JA. Sinko W, et al. Chem Biol Drug Des. 2011 Jun;77(6):412-20. doi: 10.1111/j.1747-0285.2011.01101.x. Epub 2011 Mar 29. Chem Biol Drug Des. 2011. PMID: 21294851 Free PMC article.

8

Role of secondary sialic acid binding sites in influenza N1 neuraminidase.

Sung JC, Van Wynsberghe AW, Amaro RE, Li WW, McCammon JA. Sung JC, et al. Among authors: van wynsberghe aw. J Am Chem Soc. 2010 Mar 10;132(9):2883-5. doi: 10.1021/ja9073672. J Am Chem Soc. 2010. PMID: 20155919 Free PMC article.

9

Solution X-ray scattering combined with computational modeling reveals multiple conformations of covalently bound ubiquitin on PCNA.

Tsutakawa SE, Van Wynsberghe AW, Freudenthal BD, Weinacht CP, Gakhar L, Washington MT, Zhuang Z, Tainer JA, Ivanov I. Tsutakawa SE, et al. Among authors: van wynsberghe aw. Proc Natl Acad Sci U S A. 2011 Oct 25;108(43):17672-7. doi: 10.1073/pnas.1110480108. Epub 2011 Oct 17. Proc Natl Acad Sci U S A. 2011. PMID: 22006297 Free PMC article.

10

Synthesis, Characterization, and Computational Modeling of N-(1-Ethoxyvinyl)pyridinium Triflates, an Unusual Class of Pyridinium Salts.

Shapiro JD, Sonberg JC, Schafer BC, Williams CC, Ferris HR, Reinheimer EW, Van Wynsberghe AW, Kriley CE, Majireck MM. Shapiro JD, et al. Among authors: van wynsberghe aw. Molecules. 2018 Feb 14;23(2):413. doi: 10.3390/molecules23020413. Molecules. 2018. PMID: 29443883 Free PMC article.

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