Van Wijk K - Search Results

1

Crosstalk between Metabolic Disorders and Immune Cells.

Saitoh S, Van Wijk K, Nakajima O. Saitoh S, et al. Among authors: van wijk k. Int J Mol Sci. 2021 Sep 16;22(18):10017. doi: 10.3390/ijms221810017. Int J Mol Sci. 2021. PMID: 34576181 Free PMC article. Review.

2

Heterozygous disruption of ALAS1 in mice causes an accelerated age-dependent reduction in free heme, but not total heme, in skeletal muscle and liver.

van Wijk K, Akabane T, Kimura T, Saitoh S, Okano S, Kelly VP, Takagi M, Kodama K, Takahashi K, Tanaka T, Nakajima M, Nakajima O. van Wijk K, et al. Arch Biochem Biophys. 2021 Jan 15;697:108721. doi: 10.1016/j.abb.2020.108721. Epub 2020 Dec 8. Arch Biochem Biophys. 2021. PMID: 33307066 Free article.

3

Heme Biosynthesis is Crucial for Cell Survival and Mitochondrial OXPHOS after X Irradiation.

Bo T, Van Wijk K, Nakajima O. Bo T, et al. Among authors: van wijk k. Radiat Res. 2024 Jan 1;201(1):48-54. doi: 10.1667/RADE-23-00035.1. Radiat Res. 2024. PMID: 37988802

4

Does the polyubiquitination pathway operate inside intact chloroplasts to remove proteins?

van Wijk KJ, Adam Z. van Wijk KJ, et al. Plant Cell. 2024 Apr 29:koae104. doi: 10.1093/plcell/koae104. Online ahead of print. Plant Cell. 2024. PMID: 38683741 No abstract available.

5

Detection of the Arabidopsis Proteome and Its Post-translational Modifications and the Nature of the Unobserved (Dark) Proteome in PeptideAtlas.

van Wijk KJ, Leppert T, Sun Z, Kearly A, Li M, Mendoza L, Guzchenko I, Debley E, Sauermann G, Routray P, Malhotra S, Nelson A, Sun Q, Deutsch EW. van Wijk KJ, et al. J Proteome Res. 2024 Jan 5;23(1):185-214. doi: 10.1021/acs.jproteome.3c00536. Epub 2023 Nov 21. J Proteome Res. 2024. PMID: 38104260

6

Detection and editing of the updated Arabidopsis plastid- and mitochondrial-encoded proteomes through PeptideAtlas.

van Wijk KJ, Bentolila S, Leppert T, Sun Q, Sun Z, Mendoza L, Li M, Deutsch EW. van Wijk KJ, et al. Plant Physiol. 2024 Feb 29;194(3):1411-1430. doi: 10.1093/plphys/kiad572. Plant Physiol. 2024. PMID: 37879112

7

Mapping the Arabidopsis thaliana proteome in PeptideAtlas and the nature of the unobserved (dark) proteome; strategies towards a complete proteome.

van Wijk KJ, Leppert T, Sun Z, Kearly A, Li M, Mendoza L, Guzchenko I, Debley E, Sauermann G, Routray P, Malhotra S, Nelson A, Sun Q, Deutsch EW. van Wijk KJ, et al. bioRxiv [Preprint]. 2023 Jun 5:2023.06.01.543322. doi: 10.1101/2023.06.01.543322. bioRxiv. 2023. PMID: 37333403 Free PMC article. Updated. Preprint.

8

Does the Ubiquitination Degradation Pathway Really Reach inside of the Chloroplast? A Re-Evaluation of Mass Spectrometry-Based Assignments of Ubiquitination.

van Wijk KJ, Leppert T, Sun Z, Deutsch EW. van Wijk KJ, et al. J Proteome Res. 2023 Jun 2;22(6):2079-2091. doi: 10.1021/acs.jproteome.3c00178. Epub 2023 Apr 24. J Proteome Res. 2023. PMID: 37092802

9

The CLP and PREP protease systems coordinate maturation and degradation of the chloroplast proteome in Arabidopsis thaliana.

Rowland E, Kim J, Friso G, Poliakov A, Ponnala L, Sun Q, van Wijk KJ. Rowland E, et al. Among authors: van wijk kj. New Phytol. 2022 Nov;236(4):1339-1357. doi: 10.1111/nph.18426. Epub 2022 Sep 9. New Phytol. 2022. PMID: 35946374 Free article.

10

TreeTuner: A pipeline for minimizing redundancy and complexity in large phylogenetic datasets.

Zhang X, Hu Y, Eme L, Maruyama S, Eveleigh RJM, Curtis BA, Sibbald SJ, Hopkins JF, Filloramo GV, van Wijk KJ, Archibald JM. Zhang X, et al. Among authors: van wijk kj. STAR Protoc. 2022 Feb 15;3(1):101175. doi: 10.1016/j.xpro.2022.101175. eCollection 2022 Mar 18. STAR Protoc. 2022. PMID: 35243369 Free PMC article.

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