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A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. Iorizzo M, et al. Among authors: van deynze a. Nat Genet. 2016 Jun;48(6):657-66. doi: 10.1038/ng.3565. Epub 2016 May 9. Nat Genet. 2016. PMID: 27158781
An anchored chromosome-scale genome assembly of spinach improves annotation and reveals extensive gene rearrangements in euasterids.
Hulse-Kemp AM, Bostan H, Chen S, Ashrafi H, Stoffel K, Sanseverino W, Li L, Cheng S, Schatz MC, Garvin T, du Toit LJ, Tseng E, Chin J, Iorizzo M, Van Deynze A. Hulse-Kemp AM, et al. Among authors: van deynze a. Plant Genome. 2021 Jul;14(2):e20101. doi: 10.1002/tpg2.20101. Epub 2021 Jun 10. Plant Genome. 2021. PMID: 34109759 Free article.
Population genomics identifies genetic signatures of carrot domestication and improvement and uncovers the origin of high-carotenoid orange carrots.
Coe K, Bostan H, Rolling W, Turner-Hissong S, Macko-Podgórni A, Senalik D, Liu S, Seth R, Curaba J, Mengist MF, Grzebelus D, Van Deynze A, Dawson J, Ellison S, Simon P, Iorizzo M. Coe K, et al. Among authors: van deynze a. Nat Plants. 2023 Oct;9(10):1643-1658. doi: 10.1038/s41477-023-01526-6. Epub 2023 Sep 28. Nat Plants. 2023. PMID: 37770615 Free PMC article.
Chromosome-scale assembly of the Moringa oleifera Lam. genome uncovers polyploid history and evolution of secondary metabolism pathways through tandem duplication.
Chang J, Marczuk-Rojas JP, Waterman C, Garcia-Llanos A, Chen S, Ma X, Hulse-Kemp A, Van Deynze A, Van de Peer Y, Carretero-Paulet L. Chang J, et al. Among authors: van deynze a. Plant Genome. 2022 Sep;15(3):e20238. doi: 10.1002/tpg2.20238. Epub 2022 Jul 27. Plant Genome. 2022. PMID: 35894687 Free article.
Diversity in conserved genes in tomato.
Van Deynze A, Stoffel K, Buell CR, Kozik A, Liu J, van der Knaap E, Francis D. Van Deynze A, et al. Among authors: van der knaap e. BMC Genomics. 2007 Dec 18;8:465. doi: 10.1186/1471-2164-8-465. BMC Genomics. 2007. PMID: 18088428 Free PMC article.
83 results