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APPRIS: selecting functionally important isoforms.
Rodriguez JM, Pozo F, Cerdán-Vélez D, Di Domenico T, Vázquez J, Tress ML. Rodriguez JM, et al. Among authors: vazquez j. Nucleic Acids Res. 2022 Jan 7;50(D1):D54-D59. doi: 10.1093/nar/gkab1058. Nucleic Acids Res. 2022. PMID: 34755885 Free PMC article.
Analyzing the first drafts of the human proteome.
Ezkurdia I, Vázquez J, Valencia A, Tress M. Ezkurdia I, et al. Among authors: vazquez j. J Proteome Res. 2014 Aug 1;13(8):3854-5. doi: 10.1021/pr500572z. Epub 2014 Jul 16. J Proteome Res. 2014. PMID: 25014353 Free PMC article.
Most highly expressed protein-coding genes have a single dominant isoform.
Ezkurdia I, Rodriguez JM, Carrillo-de Santa Pau E, Vázquez J, Valencia A, Tress ML. Ezkurdia I, et al. Among authors: vazquez j. J Proteome Res. 2015 Apr 3;14(4):1880-7. doi: 10.1021/pr501286b. Epub 2015 Mar 11. J Proteome Res. 2015. PMID: 25732134 Free PMC article.
Correction to "Analyzing the first drafts of the human proteome".
Ezkurdia I, Vázquez J, Valencia A, Tress M. Ezkurdia I, et al. Among authors: vazquez j. J Proteome Res. 2015 Apr 3;14(4):1991. doi: 10.1021/acs.jproteome.5b00186. Epub 2015 Mar 10. J Proteome Res. 2015. PMID: 25756922 Free PMC article. No abstract available.
APPRIS 2017: principal isoforms for multiple gene sets.
Rodriguez JM, Rodriguez-Rivas J, Di Domenico T, Vázquez J, Valencia A, Tress ML. Rodriguez JM, et al. Among authors: vazquez j. Nucleic Acids Res. 2018 Jan 4;46(D1):D213-D217. doi: 10.1093/nar/gkx997. Nucleic Acids Res. 2018. PMID: 29069475 Free PMC article.
SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A. Tardaguila M, et al. Among authors: vazquez j. Genome Res. 2018 Feb 9;28(3):396-411. doi: 10.1101/gr.222976.117. Online ahead of print. Genome Res. 2018. PMID: 29440222 Free PMC article.
Comprehensive Quantification of the Modified Proteome Reveals Oxidative Heart Damage in Mitochondrial Heteroplasmy.
Bagwan N, Bonzon-Kulichenko E, Calvo E, Lechuga-Vieco AV, Michalakopoulos S, Trevisan-Herraz M, Ezkurdia I, Rodríguez JM, Magni R, Latorre-Pellicer A, Enríquez JA, Vázquez J. Bagwan N, et al. Among authors: vazquez j. Cell Rep. 2018 Jun 19;23(12):3685-3697.e4. doi: 10.1016/j.celrep.2018.05.080. Cell Rep. 2018. PMID: 29925008 Free article.
2,295 results