Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2019 4
2020 3
2021 5
2022 4
2023 4
2024 1

Text availability

Article attribute

Article type

Publication date

Search Results

19 results

Results by year

Filters applied: . Clear all
Page 1
Bayesian Optimized sample-specific Networks Obtained By Omics data (BONOBO).
Saha E, Fanfani V, Mandros P, Ben-Guebila M, Fischer J, Hoff-Shutta K, Glass K, DeMeo DL, Lopes-Ramos C, Quackenbush J. Saha E, et al. bioRxiv [Preprint]. 2023 Nov 17:2023.11.16.567119. doi: 10.1101/2023.11.16.567119. bioRxiv. 2023. PMID: 38014256 Free PMC article. Preprint.
Gene regulatory Networks Reveal Sex Difference in Lung Adenocarcinoma.
Saha E, Guebila MB, Fanfani V, Fischer J, Shutta KH, Mandros P, DeMeo DL, Quackenbush J, Lopes-Ramos CM. Saha E, et al. bioRxiv [Preprint]. 2023 Sep 24:2023.09.22.559001. doi: 10.1101/2023.09.22.559001. bioRxiv. 2023. PMID: 37790409 Free PMC article. Preprint.
The Network Zoo: a multilingual package for the inference and analysis of gene regulatory networks.
Ben Guebila M, Wang T, Lopes-Ramos CM, Fanfani V, Weighill D, Burkholz R, Schlauch D, Paulson JN, Altenbuchinger M, Shutta KH, Sonawane AR, Lim J, Calderer G, van IJzendoorn DGP, Morgan D, Marin A, Chen CY, Song Q, Saha E, DeMeo DL, Padi M, Platig J, Kuijjer ML, Glass K, Quackenbush J. Ben Guebila M, et al. Genome Biol. 2023 Mar 9;24(1):45. doi: 10.1186/s13059-023-02877-1. Genome Biol. 2023. PMID: 36894939 Free PMC article.
Proceedings of the fifth international Molecular Pathological Epidemiology (MPE) meeting.
Yao S, Campbell PT, Ugai T, Gierach G, Abubakar M, Adalsteinsson V, Almeida J, Brennan P, Chanock S, Golub T, Hanash S, Harris C, Hathaway CA, Kelsey K, Landi MT, Mahmood F, Newton C, Quackenbush J, Rodig S, Schultz N, Tearney G, Tworoger SS, Wang M, Zhang X, Garcia-Closas M, Rebbeck TR, Ambrosone CB, Ogino S. Yao S, et al. Cancer Causes Control. 2022 Aug;33(8):1107-1120. doi: 10.1007/s10552-022-01594-7. Epub 2022 Jun 27. Cancer Causes Control. 2022. PMID: 35759080 Free PMC article.
Predicting genotype-specific gene regulatory networks.
Weighill D, Ben Guebila M, Glass K, Quackenbush J, Platig J. Weighill D, et al. Genome Res. 2022 Mar;32(3):524-533. doi: 10.1101/gr.275107.120. Epub 2022 Feb 22. Genome Res. 2022. PMID: 35193937 Free PMC article.
Environmental Influences Measured by Epigenetic Clock and Vulnerability Components at Birth Impact Clinical ASD Heterogeneity.
Neri de Souza Reis V, Tahira AC, Daguano Gastaldi V, Mari P, Portolese J, Feio Dos Santos AC, Lisboa B, Mari J, Caetano SC, Brunoni D, Bordini D, Silvestre de Paula C, Vêncio RZN, Quackenbush J, Brentani H. Neri de Souza Reis V, et al. Genes (Basel). 2021 Sep 17;12(9):1433. doi: 10.3390/genes12091433. Genes (Basel). 2021. PMID: 34573415 Free PMC article.
GRAND: a database of gene regulatory network models across human conditions.
Ben Guebila M, Lopes-Ramos CM, Weighill D, Sonawane AR, Burkholz R, Shamsaei B, Platig J, Glass K, Kuijjer ML, Quackenbush J. Ben Guebila M, et al. Nucleic Acids Res. 2022 Jan 7;50(D1):D610-D621. doi: 10.1093/nar/gkab778. Nucleic Acids Res. 2022. PMID: 34508353 Free PMC article.
19 results