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2022 5
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Page 1
Functional variants identify sex-specific genes and pathways in Alzheimer's Disease.
Bourquard T, Lee K, Al-Ramahi I, Pham M, Shapiro D, Lagisetty Y, Soleimani S, Mota S, Wilhelm K, Samieinasab M, Kim YW, Huh E, Asmussen J, Katsonis P, Botas J, Lichtarge O. Bourquard T, et al. Nat Commun. 2023 May 13;14(1):2765. doi: 10.1038/s41467-023-38374-z. Nat Commun. 2023. PMID: 37179358 Free PMC article.
Evolution of cisplatin resistance through coordinated metabolic reprogramming of the cellular reductive state.
Yu W, Chen Y, Putluri N, Osman A, Coarfa C, Putluri V, Kamal AHM, Asmussen JK, Katsonis P, Myers JN, Lai SY, Lu W, Stephan CC, Powell RT, Johnson FM, Skinner HD, Kazi J, Ahmed KM, Hu L, Threet A, Meyer MD, Bankson JA, Wang T, Davis J, Parker KR, Harris MA, Baek ML, Echeverria GV, Qi X, Wang J, Frederick AI, Walsh AJ, Lichtarge O, Frederick MJ, Sandulache VC. Yu W, et al. Br J Cancer. 2023 Jun;128(11):2013-2024. doi: 10.1038/s41416-023-02253-7. Epub 2023 Apr 3. Br J Cancer. 2023. PMID: 37012319 Free PMC article.
Identification of risk genes for Alzheimer's disease by gene embedding.
Lagisetty Y, Bourquard T, Al-Ramahi I, Mangleburg CG, Mota S, Soleimani S, Shulman JM, Botas J, Lee K, Lichtarge O. Lagisetty Y, et al. Cell Genom. 2022 Sep 14;2(9):100162. doi: 10.1016/j.xgen.2022.100162. Epub 2022 Jul 26. Cell Genom. 2022. PMID: 36268052 Free PMC article.
A general calculus of fitness landscapes finds genes under selection in cancers.
Hsu TK, Asmussen J, Koire A, Choi BK, Gadhikar MA, Huh E, Lin CH, Konecki DM, Kim YW, Pickering CR, Kimmel M, Donehower LA, Frederick MJ, Myers JN, Katsonis P, Lichtarge O. Hsu TK, et al. Genome Res. 2022 May;32(5):916-929. doi: 10.1101/gr.275811.121. Epub 2022 Mar 17. Genome Res. 2022. PMID: 35301263 Free PMC article.