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Computational prospecting the great viral unknown.
Hurwitz BL, U'Ren JM, Youens-Clark K. Hurwitz BL, et al. FEMS Microbiol Lett. 2016 May;363(10):fnw077. doi: 10.1093/femsle/fnw077. Epub 2016 Mar 29. FEMS Microbiol Lett. 2016. PMID: 27030726 Review.
Viral metabolic reprogramming in marine ecosystems.
Hurwitz BL, U'Ren JM. Hurwitz BL, et al. Curr Opin Microbiol. 2016 Jun;31:161-168. doi: 10.1016/j.mib.2016.04.002. Epub 2016 Apr 16. Curr Opin Microbiol. 2016. PMID: 27088500 Review.
Ecological generalism drives hyperdiversity of secondary metabolite gene clusters in xylarialean endophytes.
Franco MEE, Wisecaver JH, Arnold AE, Ju YM, Slot JC, Ahrendt S, Moore LP, Eastman KE, Scott K, Konkel Z, Mondo SJ, Kuo A, Hayes RD, Haridas S, Andreopoulos B, Riley R, LaButti K, Pangilinan J, Lipzen A, Amirebrahimi M, Yan J, Adam C, Keymanesh K, Ng V, Louie K, Northen T, Drula E, Henrissat B, Hsieh HM, Youens-Clark K, Lutzoni F, Miadlikowska J, Eastwood DC, Hamelin RC, Grigoriev IV, U'Ren JM. Franco MEE, et al. Among authors: u ren jm. New Phytol. 2022 Feb;233(3):1317-1330. doi: 10.1111/nph.17873. Epub 2021 Dec 7. New Phytol. 2022. PMID: 34797921 Free article.
Standardized multi-omics of Earth's microbiomes reveals microbial and metabolite diversity.
Shaffer JP, Nothias LF, Thompson LR, Sanders JG, Salido RA, Couvillion SP, Brejnrod AD, Lejzerowicz F, Haiminen N, Huang S, Lutz HL, Zhu Q, Martino C, Morton JT, Karthikeyan S, Nothias-Esposito M, Dührkop K, Böcker S, Kim HW, Aksenov AA, Bittremieux W, Minich JJ, Marotz C, Bryant MM, Sanders K, Schwartz T, Humphrey G, Vásquez-Baeza Y, Tripathi A, Parida L, Carrieri AP, Beck KL, Das P, González A, McDonald D, Ladau J, Karst SM, Albertsen M, Ackermann G, DeReus J, Thomas T, Petras D, Shade A, Stegen J, Song SJ, Metz TO, Swafford AD, Dorrestein PC, Jansson JK, Gilbert JA, Knight R; Earth Microbiome Project 500 (EMP500) Consortium. Shaffer JP, et al. Nat Microbiol. 2022 Dec;7(12):2128-2150. doi: 10.1038/s41564-022-01266-x. Epub 2022 Nov 28. Nat Microbiol. 2022. PMID: 36443458 Free PMC article.
Tandem repeat regions within the Burkholderia pseudomallei genome and their application for high resolution genotyping.
U'Ren JM, Schupp JM, Pearson T, Hornstra H, Friedman CL, Smith KL, Daugherty RR, Rhoton SD, Leadem B, Georgia S, Cardon M, Huynh LY, DeShazer D, Harvey SP, Robison R, Gal D, Mayo MJ, Wagner D, Currie BJ, Keim P. U'Ren JM, et al. BMC Microbiol. 2007 Mar 30;7:23. doi: 10.1186/1471-2180-7-23. BMC Microbiol. 2007. PMID: 17397553 Free PMC article.
53 results