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Towards error-free profiling of immune repertoires.
Shugay M, Britanova OV, Merzlyak EM, Turchaninova MA, Mamedov IZ, Tuganbaev TR, Bolotin DA, Staroverov DB, Putintseva EV, Plevova K, Linnemann C, Shagin D, Pospisilova S, Lukyanov S, Schumacher TN, Chudakov DM. Shugay M, et al. Among authors: turchaninova ma. Nat Methods. 2014 Jun;11(6):653-5. doi: 10.1038/nmeth.2960. Epub 2014 May 4. Nat Methods. 2014. PMID: 24793455
High-quality full-length immunoglobulin profiling with unique molecular barcoding.
Turchaninova MA, Davydov A, Britanova OV, Shugay M, Bikos V, Egorov ES, Kirgizova VI, Merzlyak EM, Staroverov DB, Bolotin DA, Mamedov IZ, Izraelson M, Logacheva MD, Kladova O, Plevova K, Pospisilova S, Chudakov DM. Turchaninova MA, et al. Nat Protoc. 2016 Sep;11(9):1599-616. doi: 10.1038/nprot.2016.093. Epub 2016 Aug 4. Nat Protoc. 2016. PMID: 27490633
Pairing of T-cell receptor chains via emulsion PCR.
Turchaninova MA, Britanova OV, Bolotin DA, Shugay M, Putintseva EV, Staroverov DB, Sharonov G, Shcherbo D, Zvyagin IV, Mamedov IZ, Linnemann C, Schumacher TN, Chudakov DM. Turchaninova MA, et al. Eur J Immunol. 2013 Sep;43(9):2507-15. doi: 10.1002/eji.201343453. Epub 2013 Jun 26. Eur J Immunol. 2013. PMID: 23696157 Free article.
High-throughput identification of antigen-specific TCRs by TCR gene capture.
Linnemann C, Heemskerk B, Kvistborg P, Kluin RJ, Bolotin DA, Chen X, Bresser K, Nieuwland M, Schotte R, Michels S, Gomez-Eerland R, Jahn L, Hombrink P, Legrand N, Shu CJ, Mamedov IZ, Velds A, Blank CU, Haanen JB, Turchaninova MA, Kerkhoven RM, Spits H, Hadrup SR, Heemskerk MH, Blankenstein T, Chudakov DM, Bendle GM, Schumacher TN. Linnemann C, et al. Among authors: turchaninova ma. Nat Med. 2013 Nov;19(11):1534-41. doi: 10.1038/nm.3359. Epub 2013 Oct 13. Nat Med. 2013. PMID: 24121928
Mother and child T cell receptor repertoires: deep profiling study.
Putintseva EV, Britanova OV, Staroverov DB, Merzlyak EM, Turchaninova MA, Shugay M, Bolotin DA, Pogorelyy MV, Mamedov IZ, Bobrynina V, Maschan M, Lebedev YB, Chudakov DM. Putintseva EV, et al. Among authors: turchaninova ma. Front Immunol. 2013 Dec 25;4:463. doi: 10.3389/fimmu.2013.00463. eCollection 2013. Front Immunol. 2013. PMID: 24400004 Free PMC article.
VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires.
Shugay M, Bagaev DV, Turchaninova MA, Bolotin DA, Britanova OV, Putintseva EV, Pogorelyy MV, Nazarov VI, Zvyagin IV, Kirgizova VI, Kirgizov KI, Skorobogatova EV, Chudakov DM. Shugay M, et al. Among authors: turchaninova ma. PLoS Comput Biol. 2015 Nov 25;11(11):e1004503. doi: 10.1371/journal.pcbi.1004503. eCollection 2015 Nov. PLoS Comput Biol. 2015. PMID: 26606115 Free PMC article.
Dynamics of Individual T Cell Repertoires: From Cord Blood to Centenarians.
Britanova OV, Shugay M, Merzlyak EM, Staroverov DB, Putintseva EV, Turchaninova MA, Mamedov IZ, Pogorelyy MV, Bolotin DA, Izraelson M, Davydov AN, Egorov ES, Kasatskaya SA, Rebrikov DV, Lukyanov S, Chudakov DM. Britanova OV, et al. Among authors: turchaninova ma. J Immunol. 2016 Jun 15;196(12):5005-13. doi: 10.4049/jimmunol.1600005. Epub 2016 May 13. J Immunol. 2016. PMID: 27183615
26 results