Tsunoda M - Search Results

1

Insights into the DNA stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido [2,3-d]pyrimidin-2-one.

Magat Juan EC, Shimizu S, Ma X, Kurose T, Haraguchi T, Zhang F, Tsunoda M, Ohkubo A, Sekine M, Shibata T, Millington CL, Williams DM, Takénaka A. Magat Juan EC, et al. Among authors: tsunoda m. Nucleic Acids Res. 2010 Oct;38(19):6737-45. doi: 10.1093/nar/gkq519. Epub 2010 Jun 16. Nucleic Acids Res. 2010. PMID: 20554855 Free PMC article.

2

X-ray structure of d(GCGAAGC); switching of partner for G:A pair in duplex form.

Sunami T, Kondo J, Tsunoda M, Sekiguchi T, Hirao I, Watanabe K, Miura K, Takénaka A. Sunami T, et al. Among authors: tsunoda m. Nucleic Acids Res Suppl. 2002;(2):181-2. doi: 10.1093/nass/2.1.181. Nucleic Acids Res Suppl. 2002. PMID: 12903165

3

Structural significances of pseudouridination and methylation of uridine residues in tRNA: X-ray analyses of DNA dodecamers containing uridine and pseudouridine.

Koike I, Naito S, Adachi W, Tsunoda M, Ono A, Takénaka A. Koike I, et al. Among authors: tsunoda m. Nucleic Acids Symp Ser (Oxf). 2004;(48):253-4. doi: 10.1093/nass/48.1.253. Nucleic Acids Symp Ser (Oxf). 2004. PMID: 17150574

4

Crystal structures of RNA 3'-terminal phosphate cyclase and its complexes with Mg2+ +ATP, ATP or Mn2+.

Shimizu S, Ohki M, Ohkubo N, Suzuki K, Tsunoda M, Sekiguchi T, Takénaka A. Shimizu S, et al. Among authors: tsunoda m. Nucleic Acids Symp Ser (Oxf). 2008;(52):221-2. doi: 10.1093/nass/nrn112. Nucleic Acids Symp Ser (Oxf). 2008. PMID: 18776333

5

Structures of DNA duplexes containing O6-carboxymethylguanine, a lesion associated with gastrointestinal cancer, reveal a mechanism for inducing pyrimidine transition mutations.

Zhang F, Tsunoda M, Suzuki K, Kikuchi Y, Wilkinson O, Millington CL, Margison GP, Williams DM, Czarina Morishita E, Takénaka A. Zhang F, et al. Among authors: tsunoda m. Nucleic Acids Res. 2013 May 1;41(10):5524-32. doi: 10.1093/nar/gkt198. Epub 2013 Apr 10. Nucleic Acids Res. 2013. PMID: 23580550 Free PMC article.

6

Water mediated Dickerson-Drew-type crystal of DNA dodecamer containing 2'-deoxy-5-formyluridine.

Tsunoda M, Kondo J, Karino N, Ueno Y, Matsuda A, Takenaka A. Tsunoda M, et al. Biophys Chem. 2002 Mar 28;95(3):227-33. doi: 10.1016/s0301-4622(01)00259-9. Biophys Chem. 2002. PMID: 12062382

7

Insights into the structures of DNA damaged by hydroxyl radical: crystal structures of DNA duplexes containing 5-formyluracil.

Tsunoda M, Sakaue T, Naito S, Sunami T, Abe N, Ueno Y, Matsuda A, Takénaka A. Tsunoda M, et al. J Nucleic Acids. 2010 Oct 7;2010:107289. doi: 10.4061/2010/107289. J Nucleic Acids. 2010. PMID: 20976303 Free PMC article.

8

O⁶-carboxymethylguanine in DNA forms a sequence context-dependent wobble base-pair structure with thymine.

Zhang F, Tsunoda M, Kikuchi Y, Wilkinson O, Millington CL, Margison GP, Williams DM, Takénaka A. Zhang F, et al. Among authors: tsunoda m. Acta Crystallogr D Biol Crystallogr. 2014 Jun;70(Pt 6):1669-79. doi: 10.1107/S1399004714006178. Epub 2014 May 30. Acta Crystallogr D Biol Crystallogr. 2014. PMID: 24914978

9

X-ray analysis of DNA dodecamer containing 2'-deoxy-N6-methoxyadenosine.

Chatake T, Toyoda T, Tsunoda M, Sunami T, Ono A, Ueno Y, Matsuda A, Takenaka A. Chatake T, et al. Among authors: tsunoda m. Nucleic Acids Symp Ser. 1997;(37):97-8. Nucleic Acids Symp Ser. 1997. PMID: 9586017

10

Crystallographic studies on damaged DNAs IV. N( 4)-methoxycytosine shows a second face for Watson-Crick base-pairing, leading to purine transition mutagenesis.

Hossain MT, Sunami T, Tsunoda M, Hikima T, Chatake T, Ueno Y, Matsuda A, Takénaka A. Hossain MT, et al. Among authors: tsunoda m. Nucleic Acids Res. 2001 Oct 1;29(19):3949-54. doi: 10.1093/nar/29.19.3949. Nucleic Acids Res. 2001. PMID: 11574676 Free PMC article.

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