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A novel in silico reverse-transcriptomics-based identification and blood-based validation of a panel of sub-type specific biomarkers in lung cancer.
Barh D, Jain N, Tiwari S, Field JK, Padin-Iruegas E, Ruibal A, López R, Herranz M, Bhattacharya A, Juneja L, Viero C, Silva A, Miyoshi A, Kumar A, Blum K, Azevedo V, Ghosh P, Liloglou T. Barh D, et al. Among authors: tiwari s. BMC Genomics. 2013;14 Suppl 6(Suppl 6):S5. doi: 10.1186/1471-2164-14-S6-S5. Epub 2013 Oct 25. BMC Genomics. 2013. PMID: 24564251 Free PMC article.
A novel comparative genomics analysis for common drug and vaccine targets in Corynebacterium pseudotuberculosis and other CMN group of human pathogens.
Barh D, Jain N, Tiwari S, Parida BP, D'Afonseca V, Li L, Ali A, Santos AR, Guimarães LC, de Castro Soares S, Miyoshi A, Bhattacharjee A, Misra AN, Silva A, Kumar A, Azevedo V. Barh D, et al. Among authors: tiwari s. Chem Biol Drug Des. 2011 Jul;78(1):73-84. doi: 10.1111/j.1747-0285.2011.01118.x. Epub 2011 May 25. Chem Biol Drug Des. 2011. PMID: 21443692
Tight controlled expression and secretion of Lactobacillus brevis SlpA in Lactococcus lactis.
Hollmann A, Saviello M, Delfederico L, Saraiva TD, Barh D, Jain N, Tiwari S, Chandra S, Gupta K, Zambare V, Kumar A, Christopher L, Misra AN, Kumavath RN, Azevedo V, Semorile L, Miyoshi A. Hollmann A, et al. Among authors: tiwari s. Biotechnol Lett. 2012 Jul;34(7):1275-81. doi: 10.1007/s10529-012-0887-6. Epub 2012 Mar 4. Biotechnol Lett. 2012. PMID: 22391736
Conserved host-pathogen PPIs. Globally conserved inter-species bacterial PPIs based conserved host-pathogen interactome derived novel target in C. pseudotuberculosis, C. diphtheriae, M. tuberculosis, C. ulcerans, Y. pestis, and E. coli targeted by Piper betel compounds.
Barh D, Gupta K, Jain N, Khatri G, León-Sicairos N, Canizalez-Roman A, Tiwari S, Verma A, Rahangdale S, Shah Hassan S, dos Santos AR, Ali A, Guimarães LC, Thiago Jucá Ramos R, Devarapalli P, Barve N, Bakhtiar M, Kumavath R, Ghosh P, Miyoshi A, Silva A, Kumar A, Misra AN, Blum K, Baumbach J, Azevedo V. Barh D, et al. Among authors: tiwari s. Integr Biol (Camb). 2013 Mar;5(3):495-509. doi: 10.1039/c2ib20206a. Integr Biol (Camb). 2013. PMID: 23288366
Exoproteome and secretome derived broad spectrum novel drug and vaccine candidates in Vibrio cholerae targeted by Piper betel derived compounds.
Barh D, Barve N, Gupta K, Chandra S, Jain N, Tiwari S, Leon-Sicairos N, Canizalez-Roman A, dos Santos AR, Hassan SS, Almeida S, Ramos RT, de Abreu VA, Carneiro AR, Soares Sde C, Castro TL, Miyoshi A, Silva A, Kumar A, Misra AN, Blum K, Braverman ER, Azevedo V. Barh D, et al. Among authors: tiwari s. PLoS One. 2013;8(1):e52773. doi: 10.1371/journal.pone.0052773. Epub 2013 Jan 30. PLoS One. 2013. PMID: 23382822 Free PMC article.
Complete genome sequence of Corynebacterium pseudotuberculosis biovar ovis strain P54B96 isolated from antelope in South Africa obtained by rapid next generation sequencing technology.
Hassan SS, Guimarães LC, Pereira Ude P, Islam A, Ali A, Bakhtiar SM, Ribeiro D, Rodrigues Dos Santos A, Soares Sde C, Dorella F, Pinto AC, Schneider MP, Barbosa MS, Almeida S, Abreu V, Aburjaile F, Carneiro AR, Cerdeira LT, Fiaux K, Barbosa E, Diniz C, Rocha FS, Ramos RT, Jain N, Tiwari S, Barh D, Miyoshi A, Müller B, Silva A, Azevedo V. Hassan SS, et al. Among authors: tiwari s. Stand Genomic Sci. 2012 Dec 19;7(2):189-99. doi: 10.4056/sigs.3066455. Epub 2012 Dec 15. Stand Genomic Sci. 2012. PMID: 23408795 Free PMC article.
PANNOTATOR: an automated tool for annotation of pan-genomes.
Santos AR, Barbosa E, Fiaux K, Zurita-Turk M, Chaitankar V, Kamapantula B, Abdelzaher A, Ghosh P, Tiwari S, Barve N, Jain N, Barh D, Silva A, Miyoshi A, Azevedo V. Santos AR, et al. Among authors: tiwari s. Genet Mol Res. 2013 Aug 16;12(3):2982-9. doi: 10.4238/2013.August.16.2. Genet Mol Res. 2013. PMID: 24065654 Free article.
C. pseudotuberculosis Phop confers virulence and may be targeted by natural compounds.
Tiwari S, da Costa MP, Almeida S, Hassan SS, Jamal SB, Oliveira A, Folador EL, Rocha F, de Abreu VA, Dorella F, Hirata R, de Oliveira DM, da Silva Teixeira MF, Silva A, Barh D, Azevedo V. Tiwari S, et al. Integr Biol (Camb). 2014 Nov;6(11):1088-99. doi: 10.1039/c4ib00140k. Integr Biol (Camb). 2014. PMID: 25212181
Proteome scale comparative modeling for conserved drug and vaccine targets identification in Corynebacterium pseudotuberculosis.
Hassan SS, Tiwari S, Guimarães LC, Jamal SB, Folador E, Sharma NB, de Castro Soares S, Almeida S, Ali A, Islam A, Póvoa FD, de Abreu VA, Jain N, Bhattacharya A, Juneja L, Miyoshi A, Silva A, Barh D, Turjanski A, Azevedo V, Ferreira RS. Hassan SS, et al. Among authors: tiwari s. BMC Genomics. 2014;15 Suppl 7(Suppl 7):S3. doi: 10.1186/1471-2164-15-S7-S3. Epub 2014 Oct 27. BMC Genomics. 2014. PMID: 25573232 Free PMC article.
Pan-genome analysis of human gastric pathogen H. pylori: comparative genomics and pathogenomics approaches to identify regions associated with pathogenicity and prediction of potential core therapeutic targets.
Ali A, Naz A, Soares SC, Bakhtiar M, Tiwari S, Hassan SS, Hanan F, Ramos R, Pereira U, Barh D, Figueiredo HC, Ussery DW, Miyoshi A, Silva A, Azevedo V. Ali A, et al. Among authors: tiwari s. Biomed Res Int. 2015;2015:139580. doi: 10.1155/2015/139580. Epub 2015 Jan 29. Biomed Res Int. 2015. PMID: 25705648 Free PMC article.
2,396 results