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AC-DIAMOND v1: accelerating large-scale DNA-protein alignment.
Mai H, Zhang Y, Li D, Leung HC, Luo R, Wong CK, Ting HF, Lam TW. Mai H, et al. Among authors: ting hf. Bioinformatics. 2018 Nov 1;34(21):3744-3746. doi: 10.1093/bioinformatics/bty391. Bioinformatics. 2018. PMID: 29771282
SOAP3-dp: fast, accurate and sensitive GPU-based short read aligner.
Luo R, Wong T, Zhu J, Liu CM, Zhu X, Wu E, Lee LK, Lin H, Zhu W, Cheung DW, Ting HF, Yiu SM, Peng S, Yu C, Li Y, Li R, Lam TW. Luo R, et al. Among authors: ting hf. PLoS One. 2013 May 31;8(5):e65632. doi: 10.1371/journal.pone.0065632. Print 2013. PLoS One. 2013. PMID: 23741504 Free PMC article.
Improving multiple sequence alignment by using better guide trees.
Zhan Q, Ye Y, Lam TW, Yiu SM, Wang Y, Ting HF. Zhan Q, et al. Among authors: ting hf. BMC Bioinformatics. 2015;16 Suppl 5(Suppl 5):S4. doi: 10.1186/1471-2105-16-S5-S4. Epub 2015 Mar 18. BMC Bioinformatics. 2015. PMID: 25859903 Free PMC article.
GLProbs: Aligning Multiple Sequences Adaptively.
Ye Y, Cheung DW, Wang Y, Yiu SM, Zhan Q, Lam TW, Ting HF. Ye Y, et al. Among authors: ting hf. IEEE/ACM Trans Comput Biol Bioinform. 2015 Jan-Feb;12(1):67-78. doi: 10.1109/TCBB.2014.2316820. IEEE/ACM Trans Comput Biol Bioinform. 2015. PMID: 26357079
24 results