Thompson DA - Search Results

1

The evolution of drug resistance in clinical isolates of Candida albicans.

Ford CB, Funt JM, Abbey D, Issi L, Guiducci C, Martinez DA, Delorey T, Li BY, White TC, Cuomo C, Rao RP, Berman J, Thompson DA, Regev A. Ford CB, et al. Among authors: thompson da. Elife. 2015 Feb 3;4:e00662. doi: 10.7554/eLife.00662. Elife. 2015. PMID: 25646566 Free PMC article.

2

Zinc Cluster Transcription Factors Alter Virulence in Candida albicans.

Issi L, Farrer RA, Pastor K, Landry B, Delorey T, Bell GW, Thompson DA, Cuomo CA, Rao RP. Issi L, et al. Among authors: thompson da. Genetics. 2017 Feb;205(2):559-576. doi: 10.1534/genetics.116.195024. Epub 2016 Dec 7. Genetics. 2017. PMID: 27932543 Free PMC article.

3

Coordinated host-pathogen transcriptional dynamics revealed using sorted subpopulations and single macrophages infected with Candida albicans.

Muñoz JF, Delorey T, Ford CB, Li BY, Thompson DA, Rao RP, Cuomo CA. Muñoz JF, et al. Among authors: thompson da. Nat Commun. 2019 Apr 8;10(1):1607. doi: 10.1038/s41467-019-09599-8. Nat Commun. 2019. PMID: 30962448 Free PMC article.

4

YMAP: a pipeline for visualization of copy number variation and loss of heterozygosity in eukaryotic pathogens.

Abbey DA, Funt J, Lurie-Weinberger MN, Thompson DA, Regev A, Myers CL, Berman J. Abbey DA, et al. Among authors: thompson da. Genome Med. 2014 Nov 20;6(11):100. doi: 10.1186/s13073-014-0100-8. eCollection 2014. Genome Med. 2014. PMID: 25505934 Free PMC article.

5

Fungal regulatory evolution: cis and trans in the balance.

Thompson DA, Regev A. Thompson DA, et al. FEBS Lett. 2009 Dec 17;583(24):3959-65. doi: 10.1016/j.febslet.2009.11.032. FEBS Lett. 2009. PMID: 19914250 Free PMC article. Review.

6

Comparative analysis of gene regulatory networks: from network reconstruction to evolution.

Thompson D, Regev A, Roy S. Thompson D, et al. Annu Rev Cell Dev Biol. 2015;31:399-428. doi: 10.1146/annurev-cellbio-100913-012908. Epub 2015 Sep 3. Annu Rev Cell Dev Biol. 2015. PMID: 26355593 Review.

7

The role of nucleosome positioning in the evolution of gene regulation.

Tsankov AM, Thompson DA, Socha A, Regev A, Rando OJ. Tsankov AM, et al. Among authors: thompson da. PLoS Biol. 2010 Jul 6;8(7):e1000414. doi: 10.1371/journal.pbio.1000414. PLoS Biol. 2010. PMID: 20625544 Free PMC article.

8

Inference and Evolutionary Analysis of Genome-Scale Regulatory Networks in Large Phylogenies.

Koch C, Konieczka J, Delorey T, Lyons A, Socha A, Davis K, Knaack SA, Thompson D, O'Shea EK, Regev A, Roy S. Koch C, et al. Cell Syst. 2017 May 24;4(5):543-558.e8. doi: 10.1016/j.cels.2017.04.010. Cell Syst. 2017. PMID: 28544882 Free PMC article.

9

Evolutionary principles of modular gene regulation in yeasts.

Thompson DA, Roy S, Chan M, Styczynsky MP, Pfiffner J, French C, Socha A, Thielke A, Napolitano S, Muller P, Kellis M, Konieczka JH, Wapinski I, Regev A. Thompson DA, et al. Elife. 2013 Jun 18;2:e00603. doi: 10.7554/eLife.00603. Elife. 2013. PMID: 23795289 Free PMC article.

10

Mitochondrial dysfunction remodels one-carbon metabolism in human cells.

Bao XR, Ong SE, Goldberger O, Peng J, Sharma R, Thompson DA, Vafai SB, Cox AG, Marutani E, Ichinose F, Goessling W, Regev A, Carr SA, Clish CB, Mootha VK. Bao XR, et al. Among authors: thompson da. Elife. 2016 Jun 16;5:e10575. doi: 10.7554/eLife.10575. Elife. 2016. PMID: 27307216 Free PMC article.

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