Tegner JN - Search Results

1

DNA Transposon Expansion is Associated with Genome Size Increase in Mudminnows.

Lehmann R, Kovařík A, Ocalewicz K, Kirtiklis L, Zuccolo A, Tegner JN, Wanzenböck J, Bernatchez L, Lamatsch DK, Symonová R. Lehmann R, et al. Among authors: tegner jn. Genome Biol Evol. 2021 Oct 1;13(10):evab228. doi: 10.1093/gbe/evab228. Genome Biol Evol. 2021. PMID: 34599322 Free PMC article.

2

TcellSubC: An Atlas of the Subcellular Proteome of Human T Cells.

Joshi RN, Stadler C, Lehmann R, Lehtiö J, Tegnér J, Schmidt A, Vesterlund M. Joshi RN, et al. Front Immunol. 2019 Nov 26;10:2708. doi: 10.3389/fimmu.2019.02708. eCollection 2019. Front Immunol. 2019. PMID: 31849937 Free PMC article.

3

Elucidating the Role of Virulence Traits in the Survival of Pathogenic E. coli PI-7 Following Disinfection.

Sivakumar K, Lehmann R, Rachmadi AT, Augsburger N, Zaouri N, Tegner J, Hong PY. Sivakumar K, et al. Front Bioeng Biotechnol. 2020 Dec 22;8:614186. doi: 10.3389/fbioe.2020.614186. eCollection 2020. Front Bioeng Biotechnol. 2020. PMID: 33415102 Free PMC article.

4

scAEGAN: Unification of single-cell genomics data by adversarial learning of latent space correspondences.

Khan SA, Lehmann R, Martinez-de-Morentin X, Maillo A, Lagani V, Kiani NA, Gomez-Cabrero D, Tegner J. Khan SA, et al. PLoS One. 2023 Feb 3;18(2):e0281315. doi: 10.1371/journal.pone.0281315. eCollection 2023. PLoS One. 2023. PMID: 36735690 Free PMC article.

5

Deep neural network prediction of genome-wide transcriptome signatures - beyond the Black-box.

Magnusson R, Tegnér JN, Gustafsson M. Magnusson R, et al. Among authors: tegner jn. NPJ Syst Biol Appl. 2022 Feb 23;8(1):9. doi: 10.1038/s41540-022-00218-9. NPJ Syst Biol Appl. 2022. PMID: 35197482 Free PMC article.

6

Building gene regulatory networks from scATAC-seq and scRNA-seq using Linked Self Organizing Maps.

Jansen C, Ramirez RN, El-Ali NC, Gomez-Cabrero D, Tegner J, Merkenschlager M, Conesa A, Mortazavi A. Jansen C, et al. PLoS Comput Biol. 2019 Nov 4;15(11):e1006555. doi: 10.1371/journal.pcbi.1006555. eCollection 2019 Nov. PLoS Comput Biol. 2019. PMID: 31682608 Free PMC article.

7

The folate-coupled enzyme MTHFD2 is a nuclear protein and promotes cell proliferation.

Gustafsson Sheppard N, Jarl L, Mahadessian D, Strittmatter L, Schmidt A, Madhusudan N, Tegnér J, Lundberg EK, Asplund A, Jain M, Nilsson R. Gustafsson Sheppard N, et al. Sci Rep. 2015 Oct 13;5:15029. doi: 10.1038/srep15029. Sci Rep. 2015. PMID: 26461067 Free PMC article.

8

Comparative Analysis of Protocols to Induce Human CD4+Foxp3+ Regulatory T Cells by Combinations of IL-2, TGF-beta, Retinoic Acid, Rapamycin and Butyrate.

Schmidt A, Eriksson M, Shang MM, Weyd H, Tegnér J. Schmidt A, et al. PLoS One. 2016 Feb 17;11(2):e0148474. doi: 10.1371/journal.pone.0148474. eCollection 2016. PLoS One. 2016. PMID: 26886923 Free PMC article.

9

Human macrophages induce CD4(+)Foxp3(+) regulatory T cells via binding and re-release of TGF-β.

Schmidt A, Zhang XM, Joshi RN, Iqbal S, Wahlund C, Gabrielsson S, Harris RA, Tegnér J. Schmidt A, et al. Immunol Cell Biol. 2016 Sep;94(8):747-62. doi: 10.1038/icb.2016.34. Epub 2016 May 10. Immunol Cell Biol. 2016. PMID: 27075967

10

In Vitro Differentiation of Human CD4+FOXP3+ Induced Regulatory T Cells (iTregs) from Naïve CD4+ T Cells Using a TGF-β-containing Protocol.

Schmidt A, Éliás S, Joshi RN, Tegnér J. Schmidt A, et al. J Vis Exp. 2016 Dec 30;(118):55015. doi: 10.3791/55015. J Vis Exp. 2016. PMID: 28060341 Free PMC article.

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