Taylor JF - Search Results

1

Diversity and population-genetic properties of copy number variations and multicopy genes in cattle.

Bickhart DM, Xu L, Hutchison JL, Cole JB, Null DJ, Schroeder SG, Song J, Garcia JF, Sonstegard TS, Van Tassell CP, Schnabel RD, Taylor JF, Lewin HA, Liu GE. Bickhart DM, et al. Among authors: taylor jf. DNA Res. 2016 Jun;23(3):253-62. doi: 10.1093/dnares/dsw013. Epub 2016 Apr 15. DNA Res. 2016. PMID: 27085184 Free PMC article.

2

Copy number variation of individual cattle genomes using next-generation sequencing.

Bickhart DM, Hou Y, Schroeder SG, Alkan C, Cardone MF, Matukumalli LK, Song J, Schnabel RD, Ventura M, Taylor JF, Garcia JF, Van Tassell CP, Sonstegard TS, Eichler EE, Liu GE. Bickhart DM, et al. Among authors: taylor jf. Genome Res. 2012 Apr;22(4):778-90. doi: 10.1101/gr.133967.111. Epub 2012 Feb 2. Genome Res. 2012. PMID: 22300768 Free PMC article.

3

SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries.

Van Tassell CP, Smith TP, Matukumalli LK, Taylor JF, Schnabel RD, Lawley CT, Haudenschild CD, Moore SS, Warren WC, Sonstegard TS. Van Tassell CP, et al. Among authors: taylor jf. Nat Methods. 2008 Mar;5(3):247-52. doi: 10.1038/nmeth.1185. Epub 2008 Feb 24. Nat Methods. 2008. PMID: 18297082

4

Detection of selective sweeps in cattle using genome-wide SNP data.

Ramey HR, Decker JE, McKay SD, Rolf MM, Schnabel RD, Taylor JF. Ramey HR, et al. Among authors: taylor jf. BMC Genomics. 2013 Jun 7;14:382. doi: 10.1186/1471-2164-14-382. BMC Genomics. 2013. PMID: 23758707 Free PMC article.

5

Worldwide patterns of ancestry, divergence, and admixture in domesticated cattle.

Decker JE, McKay SD, Rolf MM, Kim J, Molina Alcalá A, Sonstegard TS, Hanotte O, Götherström A, Seabury CM, Praharani L, Babar ME, Correia de Almeida Regitano L, Yildiz MA, Heaton MP, Liu WS, Lei CZ, Reecy JM, Saif-Ur-Rehman M, Schnabel RD, Taylor JF. Decker JE, et al. Among authors: taylor jf. PLoS Genet. 2014 Mar 27;10(3):e1004254. doi: 10.1371/journal.pgen.1004254. eCollection 2014 Mar. PLoS Genet. 2014. PMID: 24675901 Free PMC article.

6

RAPTR-SV: a hybrid method for the detection of structural variants.

Bickhart DM, Hutchison JL, Xu L, Schnabel RD, Taylor JF, Reecy JM, Schroeder S, Van Tassell CP, Sonstegard TS, Liu GE. Bickhart DM, et al. Among authors: taylor jf. Bioinformatics. 2015 Jul 1;31(13):2084-90. doi: 10.1093/bioinformatics/btv086. Epub 2015 Feb 16. Bioinformatics. 2015. PMID: 25686638 Free article.

7

What's in your next-generation sequence data? An exploration of unmapped DNA and RNA sequence reads from the bovine reference individual.

Whitacre LK, Tizioto PC, Kim J, Sonstegard TS, Schroeder SG, Alexander LJ, Medrano JF, Schnabel RD, Taylor JF, Decker JE. Whitacre LK, et al. Among authors: taylor jf. BMC Genomics. 2015 Dec 29;16:1114. doi: 10.1186/s12864-015-2313-7. BMC Genomics. 2015. PMID: 26714747 Free PMC article.

8

Lessons for livestock genomics from genome and transcriptome sequencing in cattle and other mammals.

Taylor JF, Whitacre LK, Hoff JL, Tizioto PC, Kim J, Decker JE, Schnabel RD. Taylor JF, et al. Genet Sel Evol. 2016 Aug 17;48(1):59. doi: 10.1186/s12711-016-0237-6. Genet Sel Evol. 2016. PMID: 27534529 Free PMC article.

9

Association of single nucleotide polymorphisms in candidate genes previously related to genetic variation in fertility with phenotypic measurements of reproductive function in Holstein cows.

Ortega MS, Denicol AC, Cole JB, Null DJ, Taylor JF, Schnabel RD, Hansen PJ. Ortega MS, et al. Among authors: taylor jf. J Dairy Sci. 2017 May;100(5):3725-3734. doi: 10.3168/jds.2016-12260. Epub 2017 Mar 2. J Dairy Sci. 2017. PMID: 28259397 Free article.

10

Candidate lethal haplotypes and causal mutations in Angus cattle.

Hoff JL, Decker JE, Schnabel RD, Taylor JF. Hoff JL, et al. Among authors: taylor jf. BMC Genomics. 2017 Oct 18;18(1):799. doi: 10.1186/s12864-017-4196-2. BMC Genomics. 2017. PMID: 29047335 Free PMC article.

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