Tannenbaum A - Search Results

1

Geometric graph neural networks on multi-omics data to predict cancer survival outcomes.

Zhu J, Oh JH, Simhal AK, Elkin R, Norton L, Deasy JO, Tannenbaum A. Zhu J, et al. Among authors: tannenbaum a. Comput Biol Med. 2023 Sep;163:107117. doi: 10.1016/j.compbiomed.2023.107117. Epub 2023 Jun 9. Comput Biol Med. 2023. PMID: 37329617 Free PMC article.

2

The maximum entropy principle for compositional data.

Weistuch C, Zhu J, Deasy JO, Tannenbaum AR. Weistuch C, et al. BMC Bioinformatics. 2022 Oct 29;23(1):449. doi: 10.1186/s12859-022-05007-z. BMC Bioinformatics. 2022. PMID: 36309638 Free PMC article.

3

Changes in the geometry and robustness of diffusion tensor imaging networks: Secondary analysis from a randomized controlled trial of young autistic children receiving an umbilical cord blood infusion.

Simhal AK, Carpenter KLH, Kurtzberg J, Song A, Tannenbaum A, Zhang L, Sapiro G, Dawson G. Simhal AK, et al. Among authors: tannenbaum a. Front Psychiatry. 2022 Oct 20;13:1026279. doi: 10.3389/fpsyt.2022.1026279. eCollection 2022. Front Psychiatry. 2022. PMID: 36353577 Free PMC article.

4

Functional transcriptional signatures for tumor-type-agnostic phenotype prediction.

Weistuch C, Murgas KA, Zhu J, Norton L, Dill KA, Tannenbaum AR, Deasy JO. Weistuch C, et al. Among authors: tannenbaum ar. bioRxiv [Preprint]. 2024 Mar 12:2023.04.12.536595. doi: 10.1101/2023.04.12.536595. bioRxiv. 2024. PMID: 37090606 Free PMC article. Preprint.

5

Predicting the germline dependence of hematuria risk in prostate cancer radiotherapy patients.

Oh JH, Lee S, Thor M, Rosenstein BS, Tannenbaum A, Kerns S, Deasy JO. Oh JH, et al. Among authors: tannenbaum a. Radiother Oncol. 2023 Aug;185:109723. doi: 10.1016/j.radonc.2023.109723. Epub 2023 May 25. Radiother Oncol. 2023. PMID: 37244355 Free article.

6

Improved prediction of drug-induced liver injury literature using natural language processing and machine learning methods.

Oh JH, Tannenbaum A, Deasy JO. Oh JH, et al. Among authors: tannenbaum a. Front Genet. 2023 Jul 17;14:1161047. doi: 10.3389/fgene.2023.1161047. eCollection 2023. Front Genet. 2023. PMID: 37529777 Free PMC article.

7

Mapping the Single-cell Differentiation Landscape of Osteosarcoma.

Truong DD, Weistuch C, Murgas KA, Deasy JO, Mikos AG, Tannenbaum A, Ludwig J. Truong DD, et al. Among authors: tannenbaum a. bioRxiv [Preprint]. 2023 Sep 14:2023.09.13.555156. doi: 10.1101/2023.09.13.555156. bioRxiv. 2023. PMID: 37745374 Free PMC article. Preprint.

8

Wasserstein HOG: Local Directionality Extraction via Optimal Transport.

Zhu J, Veeraraghavan H, Jiang J, Oh JH, Norton L, Deasy JO, Tannenbaum A. Zhu J, et al. Among authors: tannenbaum a. IEEE Trans Med Imaging. 2024 Mar;43(3):916-927. doi: 10.1109/TMI.2023.3325295. Epub 2024 Mar 5. IEEE Trans Med Imaging. 2024. PMID: 37874704 Free PMC article.

9

Gene interaction network analysis in multiple myeloma detects complex immune dysregulation associated with shorter survival.

Simhal AK, Maclachlan KH, Elkin R, Zhu J, Norton L, Deasy JO, Oh JH, Usmani SZ, Tannenbaum A. Simhal AK, et al. Among authors: tannenbaum a. Blood Cancer J. 2023 Nov 30;13(1):175. doi: 10.1038/s41408-023-00935-2. Blood Cancer J. 2023. PMID: 38030619 Free PMC article.

10

Multi-Scale Geometric Network Analysis Identifies Melanoma Immunotherapy Response Gene Modules.

Murgas KA, Elkin R, Riaz N, Saucan E, Deasy JO, Tannenbaum AR. Murgas KA, et al. Among authors: tannenbaum ar. bioRxiv [Preprint]. 2023 Nov 21:2023.11.21.568144. doi: 10.1101/2023.11.21.568144. bioRxiv. 2023. PMID: 38045365 Free PMC article. Updated. Preprint.

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