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Benchmarking single-cell RNA-sequencing protocols for cell atlas projects.
Mereu E, Lafzi A, Moutinho C, Ziegenhain C, McCarthy DJ, Álvarez-Varela A, Batlle E, Sagar, Grün D, Lau JK, Boutet SC, Sanada C, Ooi A, Jones RC, Kaihara K, Brampton C, Talaga Y, Sasagawa Y, Tanaka K, Hayashi T, Braeuning C, Fischer C, Sauer S, Trefzer T, Conrad C, Adiconis X, Nguyen LT, Regev A, Levin JZ, Parekh S, Janjic A, Wange LE, Bagnoli JW, Enard W, Gut M, Sandberg R, Nikaido I, Gut I, Stegle O, Heyn H. Mereu E, et al. Among authors: tanaka k. Nat Biotechnol. 2020 Jun;38(6):747-755. doi: 10.1038/s41587-020-0469-4. Epub 2020 Apr 6. Nat Biotechnol. 2020. PMID: 32518403
Developmental excitation-inhibition imbalance underlying psychoses revealed by single-cell analyses of discordant twins-derived cerebral organoids.
Sawada T, Chater TE, Sasagawa Y, Yoshimura M, Fujimori-Tonou N, Tanaka K, Benjamin KJM, Paquola ACM, Erwin JA, Goda Y, Nikaido I, Kato T. Sawada T, et al. Among authors: tanaka k. Mol Psychiatry. 2020 Nov;25(11):2695-2711. doi: 10.1038/s41380-020-0844-z. Epub 2020 Aug 7. Mol Psychiatry. 2020. PMID: 32764691 Free PMC article.
A common epigenetic mechanism across different cellular origins underlies systemic immune dysregulation in an idiopathic autism mouse model.
Lin CW, Septyaningtrias DE, Chao HW, Konda M, Atarashi K, Takeshita K, Tamada K, Nomura J, Sasagawa Y, Tanaka K, Nikaido I, Honda K, McHugh TJ, Takumi T. Lin CW, et al. Among authors: tanaka k. Mol Psychiatry. 2022 Aug;27(8):3343-3354. doi: 10.1038/s41380-022-01566-y. Epub 2022 May 2. Mol Psychiatry. 2022. PMID: 35491410
Separation and analysis of mono-glucosylated lipids in brain and skin by hydrophilic interaction chromatography based on carbohydrate and lipid moiety.
Nakajima K, Akiyama H, Tanaka K, Kohyama-Koganeya A, Greimel P, Hirabayashi Y. Nakajima K, et al. Among authors: tanaka k. J Chromatogr B Analyt Technol Biomed Life Sci. 2016 Sep 15;1031:146-153. doi: 10.1016/j.jchromb.2016.07.047. Epub 2016 Jul 26. J Chromatogr B Analyt Technol Biomed Life Sci. 2016. PMID: 27485395
Shark genomes provide insights into elasmobranch evolution and the origin of vertebrates.
Hara Y, Yamaguchi K, Onimaru K, Kadota M, Koyanagi M, Keeley SD, Tatsumi K, Tanaka K, Motone F, Kageyama Y, Nozu R, Adachi N, Nishimura O, Nakagawa R, Tanegashima C, Kiyatake I, Matsumoto R, Murakumo K, Nishida K, Terakita A, Kuratani S, Sato K, Hyodo S, Kuraku S. Hara Y, et al. Among authors: tanaka k. Nat Ecol Evol. 2018 Nov;2(11):1761-1771. doi: 10.1038/s41559-018-0673-5. Epub 2018 Oct 8. Nat Ecol Evol. 2018. PMID: 30297745
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