Suyama M - Search Results

1

A network of conserved co-occurring motifs for the regulation of alternative splicing.

Suyama M, Harrington ED, Vinokourova S, von Knebel Doeberitz M, Ohara O, Bork P. Suyama M, et al. Nucleic Acids Res. 2010 Dec;38(22):7916-26. doi: 10.1093/nar/gkq705. Epub 2010 Aug 11. Nucleic Acids Res. 2010. PMID: 20702423 Free PMC article.

2

HUGE: a database for human large proteins identified by Kazusa cDNA sequencing project.

Suyama M, Nagase T, Ohara O. Suyama M, et al. Nucleic Acids Res. 1999 Jan 1;27(1):338-9. doi: 10.1093/nar/27.1.338. Nucleic Acids Res. 1999. PMID: 9847221 Free PMC article.

3

HUGE: a database for human large proteins identified in the Kazusa cDNA sequencing project.

Kikuno R, Nagase T, Suyama M, Waki M, Hirosawa M, Ohara O. Kikuno R, et al. Among authors: suyama m. Nucleic Acids Res. 2000 Jan 1;28(1):331-2. doi: 10.1093/nar/28.1.331. Nucleic Acids Res. 2000. PMID: 10592264 Free PMC article.

4

Re-annotating the Mycoplasma pneumoniae genome sequence: adding value, function and reading frames.

Dandekar T, Huynen M, Regula JT, Ueberle B, Zimmermann CU, Andrade MA, Doerks T, Sánchez-Pulido L, Snel B, Suyama M, Yuan YP, Herrmann R, Bork P. Dandekar T, et al. Among authors: suyama m. Nucleic Acids Res. 2000 Sep 1;28(17):3278-88. doi: 10.1093/nar/28.17.3278. Nucleic Acids Res. 2000. PMID: 10954595 Free PMC article.

5

TAP (NXF1) belongs to a multigene family of putative RNA export factors with a conserved modular architecture.

Herold A, Suyama M, Rodrigues JP, Braun IC, Kutay U, Carmo-Fonseca M, Bork P, Izaurralde E. Herold A, et al. Among authors: suyama m. Mol Cell Biol. 2000 Dec;20(23):8996-9008. doi: 10.1128/MCB.20.23.8996-9008.2000. Mol Cell Biol. 2000. PMID: 11073998 Free PMC article.

6

Evolution of prokaryotic gene order: genome rearrangements in closely related species.

Suyama M, Bork P. Suyama M, et al. Trends Genet. 2001 Jan;17(1):10-3. doi: 10.1016/s0168-9525(00)02159-4. Trends Genet. 2001. PMID: 11163906

7

Prediction of structural domains of TAP reveals details of its interaction with p15 and nucleoporins.

Suyama M, Doerks T, Braun IC, Sattler M, Izaurralde E, Bork P. Suyama M, et al. EMBO Rep. 2000 Jul;1(1):53-8. doi: 10.1093/embo-reports/kvd009. EMBO Rep. 2000. PMID: 11256625 Free PMC article.

8

Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster.

Zdobnov EM, von Mering C, Letunic I, Torrents D, Suyama M, Copley RR, Christophides GK, Thomasova D, Holt RA, Subramanian GM, Mueller HM, Dimopoulos G, Law JH, Wells MA, Birney E, Charlab R, Halpern AL, Kokoza E, Kraft CL, Lai Z, Lewis S, Louis C, Barillas-Mury C, Nusskern D, Rubin GM, Salzberg SL, Sutton GG, Topalis P, Wides R, Wincker P, Yandell M, Collins FH, Ribeiro J, Gelbart WM, Kafatos FC, Bork P. Zdobnov EM, et al. Among authors: suyama m. Science. 2002 Oct 4;298(5591):149-59. doi: 10.1126/science.1077061. Science. 2002. PMID: 12364792

9

DomCut: prediction of inter-domain linker regions in amino acid sequences.

Suyama M, Ohara O. Suyama M, et al. Bioinformatics. 2003 Mar 22;19(5):673-4. doi: 10.1093/bioinformatics/btg031. Bioinformatics. 2003. PMID: 12651735

10

A genome-wide survey of human pseudogenes.

Torrents D, Suyama M, Zdobnov E, Bork P. Torrents D, et al. Among authors: suyama m. Genome Res. 2003 Dec;13(12):2559-67. doi: 10.1101/gr.1455503. Genome Res. 2003. PMID: 14656963 Free PMC article.

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