Suresh G - Search Results

1

Molecular Dynamics Study of the Structure, Flexibility, and Hydrophilicity of PETIM Dendrimers: A Comparison with PAMAM Dendrimers.

Kanchi S, Suresh G, Priyakumar UD, Ayappa KG, Maiti PK. Kanchi S, et al. Among authors: suresh g. J Phys Chem B. 2015 Oct 15;119(41):12990-3001. doi: 10.1021/acs.jpcb.5b07124. Epub 2015 Oct 6. J Phys Chem B. 2015. PMID: 26378813

2

Structures, dynamics, and stabilities of fully modified locked nucleic acid (β-D-LNA and α-L-LNA) duplexes in comparison to pure DNA and RNA duplexes.

Suresh G, Priyakumar UD. Suresh G, et al. J Phys Chem B. 2013 May 9;117(18):5556-64. doi: 10.1021/jp4016068. Epub 2013 Apr 25. J Phys Chem B. 2013. PMID: 23617391

3

Atomistic investigation of the effect of incremental modification of deoxyribose sugars by locked nucleic acid (β-D-LNA and α-L-LNA) moieties on the structures and thermodynamics of DNA-RNA hybrid duplexes.

Suresh G, Priyakumar UD. Suresh G, et al. J Phys Chem B. 2014 Jun 5;118(22):5853-63. doi: 10.1021/jp5014779. Epub 2014 May 21. J Phys Chem B. 2014. PMID: 24845216

4

Molecular simulations on the thermal stabilization of DNA by hyperthermophilic chromatin protein Sac7d, and associated conformational transitions.

Priyakumar UD, Harika G, Suresh G. Priyakumar UD, et al. Among authors: suresh g. J Phys Chem B. 2010 Dec 16;114(49):16548-57. doi: 10.1021/jp101583d. Epub 2010 Nov 18. J Phys Chem B. 2010. PMID: 21086967

5

DNA-RNA hybrid duplexes with decreasing pyrimidine content in the DNA strand provide structural snapshots for the A- to B-form conformational transition of nucleic acids.

Suresh G, Priyakumar UD. Suresh G, et al. Phys Chem Chem Phys. 2014 Sep 14;16(34):18148-55. doi: 10.1039/c4cp02478h. Phys Chem Chem Phys. 2014. PMID: 25052200

6

Inclusion of methoxy groups inverts the thermodynamic stabilities of DNA-RNA hybrid duplexes: A molecular dynamics simulation study.

Suresh G, Priyakumar UD. Suresh G, et al. J Mol Graph Model. 2015 Sep;61:150-9. doi: 10.1016/j.jmgm.2015.07.009. Epub 2015 Jul 29. J Mol Graph Model. 2015. PMID: 26254870

7

Ligand-Induced Stabilization of a Duplex-like Architecture Is Crucial for the Switching Mechanism of the SAM-III Riboswitch.

Suresh G, Srinivasan H, Nanda S, Priyakumar UD. Suresh G, et al. Biochemistry. 2016 Jun 21;55(24):3349-60. doi: 10.1021/acs.biochem.5b00973. Epub 2016 Jun 13. Biochemistry. 2016. PMID: 27249101

8

Urea Mimics Nucleobases by Preserving the Helical Integrity of B-DNA Duplexes via Hydrogen Bonding and Stacking Interactions.

Suresh G, Padhi S, Patil I, Priyakumar UD. Suresh G, et al. Biochemistry. 2016 Oct 11;55(40):5653-5664. doi: 10.1021/acs.biochem.6b00309. Epub 2016 Sep 29. Biochemistry. 2016. PMID: 27657980

9

Double zipper helical assembly of deoxyoligonucleotides: mutual templating and chiral imprinting to form hybrid DNA ensembles.

Narayanaswamy N, Suresh G, Priyakumar UD, Govindaraju T. Narayanaswamy N, et al. Among authors: suresh g. Chem Commun (Camb). 2015 Mar 28;51(25):5493-6. doi: 10.1039/c4cc06759b. Chem Commun (Camb). 2015. PMID: 25233941

10

Crenarchaeal chromatin proteins Cren7 and Sul7 compact DNA by inducing rigid bends.

Driessen RP, Meng H, Suresh G, Shahapure R, Lanzani G, Priyakumar UD, White MF, Schiessel H, van Noort J, Dame RT. Driessen RP, et al. Among authors: suresh g. Nucleic Acids Res. 2013 Jan 7;41(1):196-205. doi: 10.1093/nar/gks1053. Epub 2012 Nov 15. Nucleic Acids Res. 2013. PMID: 23155062 Free PMC article.

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